Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Gm15358-201ENSMUST00000119249 520 ntBASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Gm5177-201ENSMUST00000183092 997 ntBASIC16.68■□□□□ 0.26
Col4a6B1AVK5 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col4a6B1AVK5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.67■□□□□ 0.26
Col4a6B1AVK5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col4a6B1AVK5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.66■□□□□ 0.26
Col4a6B1AVK5 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm45747-201ENSMUST00000212203 999 ntBASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col4a6B1AVK5 Gm27494-201ENSMUST00000184735 189 ntBASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm45612-201ENSMUST00000211320 160 ntBASIC16.65■□□□□ 0.26
Col4a6B1AVK5 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col4a6B1AVK5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Gm15427-201ENSMUST00000117288 531 ntBASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Gm43438-201ENSMUST00000198133 379 ntBASIC16.64■□□□□ 0.25
Col4a6B1AVK5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Col4a6B1AVK5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.63■□□□□ 0.25
Col4a6B1AVK5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Col4a6B1AVK5 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms