Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Gm11336-201ENSMUST00000118168 334 ntBASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.41■□□□□ 0.38
Sh2d4bA6X942 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.41■□□□□ 0.38
Sh2d4bA6X942 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Gm12644-201ENSMUST00000119935 606 ntBASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh2d4bA6X942 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Sh2d4bA6X942 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.39■□□□□ 0.38
Sh2d4bA6X942 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh2d4bA6X942 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Gm1401-201ENSMUST00000122048 772 ntBASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.38■□□□□ 0.37
Sh2d4bA6X942 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh2d4bA6X942 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms