Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.26□□□□□ -0.45
Col6a5A6H584 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.26□□□□□ -0.45
Col6a5A6H584 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a5A6H584 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a5A6H584 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Col6a5A6H584 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.25□□□□□ -0.45
Col6a5A6H584 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Iqck-206ENSMUST00000208658 2891 ntBASIC12.25□□□□□ -0.45
Col6a5A6H584 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.25□□□□□ -0.45
Col6a5A6H584 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a5A6H584 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col6a5A6H584 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a5A6H584 Gm14928-201ENSMUST00000120198 477 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Mir1938-201ENSMUST00000158746 100 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.24□□□□□ -0.45
Col6a5A6H584 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm13453-201ENSMUST00000118708 357 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm44855-201ENSMUST00000205725 362 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Gm5779-201ENSMUST00000218467 910 ntBASIC12.24□□□□□ -0.45
Col6a5A6H584 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Col6a5A6H584 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Col6a5A6H584 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms