Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm29707-201ENSMUST00000196325 491 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.19□□□□□ -0.3
Chd6A3KFM7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd6A3KFM7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd6A3KFM7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.18□□□□□ -0.3
Chd6A3KFM7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd6A3KFM7 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gm20553-201ENSMUST00000204205 844 ntBASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gm45384-201ENSMUST00000210451 277 ntBASIC13.17□□□□□ -0.3
Chd6A3KFM7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd6A3KFM7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms