Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm11628-201ENSMUST00000117568 171 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Nsd1-205ENSMUST00000224693 852 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gm8062-201ENSMUST00000139696 444 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 AC119177.1-201ENSMUST00000227647 1332 ntBASIC8.56□□□□□ -1.04
Ubr4A2AN08 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Ubr4A2AN08 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC8.55□□□□□ -1.04
Ubr4A2AN08 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Gm9063-201ENSMUST00000223299 582 ntBASIC8.55□□□□□ -1.04
Ubr4A2AN08 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Mir7036b-201ENSMUST00000184791 63 ntBASIC8.55□□□□□ -1.04
Ubr4A2AN08 Gm44974-201ENSMUST00000206387 1279 ntBASIC8.55□□□□□ -1.04
Ubr4A2AN08 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC8.55□□□□□ -1.04
Ubr4A2AN08 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Zfp264-201ENSMUST00000208656 1563 ntBASIC8.55□□□□□ -1.04
Ubr4A2AN08 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Ubr4A2AN08 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 AC131710.1-201ENSMUST00000228336 990 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm45167-201ENSMUST00000208007 322 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Ighv5-13-201ENSMUST00000193550 290 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm15806-201ENSMUST00000120696 955 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm27838-201ENSMUST00000184829 128 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.54□□□□□ -1.04
Ubr4A2AN08 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Ubr4A2AN08 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms