Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm12644-201ENSMUST00000119935 606 ntBASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm27867-201ENSMUST00000184778 125 ntBASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm27459-201ENSMUST00000184860 107 ntBASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rpl9-ps6A0A140T8T4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gm43347-201ENSMUST00000200226 580 ntBASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rpl9-ps6A0A140T8T4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms