Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv17A0A140T8P8 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Phf7-203ENSMUST00000226565 1971 ntBASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv17A0A140T8P8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv17A0A140T8P8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gm26039-201ENSMUST00000158152 144 ntBASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trbv17A0A140T8P8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Actl10-202ENSMUST00000226583 1501 ntBASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm13186-201ENSMUST00000118031 316 ntBASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trbv17A0A140T8P8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms