Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 AW822252-206ENSMUST00000208904 237 ntBASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cfap99A0A140LIX9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cfap99A0A140LIX9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cfap99A0A140LIX9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cfap99A0A140LIX9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cfap99A0A140LIX9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms