Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trbv29A0A0G2LB96 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trbv29A0A0G2LB96 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Phf7-203ENSMUST00000226565 1971 ntBASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Gm18115-201ENSMUST00000221209 621 ntBASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trbv29A0A0G2LB96 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Trbv29A0A0G2LB96 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Trbv29A0A0G2LB96 Prob1-201ENSMUST00000097619 3021 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms