Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm17661-201ENSMUST00000170317 270 ntBASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-4A0A0G2JG01 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-4A0A0G2JG01 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-4A0A0G2JG01 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms