Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trbv16A0A0B4J1H3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm20760-201ENSMUST00000179197 648 ntBASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm27463-201ENSMUST00000183569 57 ntBASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trbv16A0A0B4J1H3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm3375-201ENSMUST00000203929 796 ntBASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trbv16A0A0B4J1H3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm42473-201ENSMUST00000201056 2291 ntBASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms