Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdh7A0A0A6YY83 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdh7A0A0A6YY83 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdh7A0A0A6YY83 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdh7A0A0A6YY83 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdh7A0A0A6YY83 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdh7A0A0A6YY83 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms