Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbc1A0A0A6YWV4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.98□□□□□ -0.01
Trbc1A0A0A6YWV4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm18421-201ENSMUST00000204122 625 ntBASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbc1A0A0A6YWV4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbc1A0A0A6YWV4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbc1A0A0A6YWV4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbc1A0A0A6YWV4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbc1A0A0A6YWV4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbc1A0A0A6YWV4 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trbc1A0A0A6YWV4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trbc1A0A0A6YWV4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms