Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Prob1-201ENSMUST00000097619 3021 ntBASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6n-6A0A075B6B2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm37292-201ENSMUST00000192062 758 ntBASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6n-6A0A075B6B2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav6n-6A0A075B6B2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms