Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Phf7-203ENSMUST00000226565 1971 ntBASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav12d-3A0A075B6A4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Gm9988-201ENSMUST00000069786 435 ntBASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav12d-3A0A075B6A4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav12d-3A0A075B6A4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Sybu-209ENSMUST00000228639 4113 ntBASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav12d-3A0A075B6A4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav12d-3A0A075B6A4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms