Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav9-2A0A075B647 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Haglr-201ENSMUST00000100000 2085 ntBASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Gm7977-201ENSMUST00000193787 748 ntBASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Gm17808-201ENSMUST00000200859 894 ntBASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav9-2A0A075B647 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Gm11950-201ENSMUST00000121615 838 ntBASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Gm29518-201ENSMUST00000190858 372 ntBASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav9-2A0A075B647 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav9-2A0A075B647 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms