Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm37856-201ENSMUST00000191634 999 ntBASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.88□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm5643-201ENSMUST00000117081 966 ntBASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms