Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Trav6-1A0A075B5Z8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm18115-201ENSMUST00000221209 621 ntBASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-1A0A075B5Z8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-1A0A075B5Z8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Timm23-208ENSMUST00000226683 750 ntBASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-1A0A075B5Z8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.08□□□□□ -0.31
Trav6-1A0A075B5Z8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-1A0A075B5Z8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm12527-201ENSMUST00000117967 564 ntBASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-1A0A075B5Z8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms