Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav5-1A0A075B5Z7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav5-1A0A075B5Z7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm24589-201ENSMUST00000116692 94 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm12644-201ENSMUST00000119935 606 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Birc2-201ENSMUST00000054878 378 ntBASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav5-1A0A075B5Z7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav5-1A0A075B5Z7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav5-1A0A075B5Z7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms