Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.99■■■□□ 2.71
Ybx3Q9JKB3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ybx3Q9JKB3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC31.98■■■□□ 2.71
Ybx3Q9JKB3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC31.97■■■□□ 2.71
Ybx3Q9JKB3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ybx3Q9JKB3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.95■■■□□ 2.71
Ybx3Q9JKB3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
Ybx3Q9JKB3 AC093043.1-201ENSMUST00000226700 898 ntBASIC31.94■■■□□ 2.7
Ybx3Q9JKB3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ybx3Q9JKB3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ybx3Q9JKB3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.9■■■□□ 2.7
Ybx3Q9JKB3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
Ybx3Q9JKB3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Ybx3Q9JKB3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ybx3Q9JKB3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.88■■■□□ 2.69
Ybx3Q9JKB3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ybx3Q9JKB3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC31.87■■■□□ 2.69
Ybx3Q9JKB3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ybx3Q9JKB3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Ybx3Q9JKB3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Ybx3Q9JKB3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ybx3Q9JKB3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ybx3Q9JKB3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC31.85■■■□□ 2.69
Ybx3Q9JKB3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ybx3Q9JKB3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ybx3Q9JKB3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.85■■■□□ 2.69
Ybx3Q9JKB3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Ybx3Q9JKB3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ybx3Q9JKB3 Rps24-207ENSMUST00000224568 714 ntBASIC31.83■■■□□ 2.69
Ybx3Q9JKB3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ybx3Q9JKB3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Ybx3Q9JKB3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.82■■■□□ 2.68
Ybx3Q9JKB3 Gm9812-201ENSMUST00000061934 968 ntBASIC31.82■■■□□ 2.68
Ybx3Q9JKB3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
Ybx3Q9JKB3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Ybx3Q9JKB3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
Ybx3Q9JKB3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ybx3Q9JKB3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Ybx3Q9JKB3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ybx3Q9JKB3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
Ybx3Q9JKB3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ybx3Q9JKB3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.79■■■□□ 2.68
Ybx3Q9JKB3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC31.77■■■□□ 2.68
Ybx3Q9JKB3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ybx3Q9JKB3 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.75■■■□□ 2.67
Ybx3Q9JKB3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ybx3Q9JKB3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
Ybx3Q9JKB3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Ybx3Q9JKB3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Ybx3Q9JKB3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Ybx3Q9JKB3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Ybx3Q9JKB3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC31.73■■■□□ 2.67
Ybx3Q9JKB3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Ybx3Q9JKB3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.72■■■□□ 2.67
Ybx3Q9JKB3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Ybx3Q9JKB3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Ybx3Q9JKB3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Ybx3Q9JKB3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Ybx3Q9JKB3 Gm45102-201ENSMUST00000207427 857 ntBASIC31.69■■■□□ 2.66
Ybx3Q9JKB3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC31.69■■■□□ 2.66
Ybx3Q9JKB3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ybx3Q9JKB3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Ybx3Q9JKB3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ybx3Q9JKB3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Ybx3Q9JKB3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ybx3Q9JKB3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Ybx3Q9JKB3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Ybx3Q9JKB3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Ybx3Q9JKB3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Ybx3Q9JKB3 Gm15820-201ENSMUST00000201566 728 ntBASIC31.66■■■□□ 2.66
Ybx3Q9JKB3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.66■■■□□ 2.66
Ybx3Q9JKB3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Ybx3Q9JKB3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC31.65■■■□□ 2.66
Ybx3Q9JKB3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.64■■■□□ 2.66
Ybx3Q9JKB3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Ybx3Q9JKB3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Ybx3Q9JKB3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ybx3Q9JKB3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Ybx3Q9JKB3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Ybx3Q9JKB3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Ybx3Q9JKB3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Ybx3Q9JKB3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Ybx3Q9JKB3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Ybx3Q9JKB3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Ybx3Q9JKB3 Gm14117-201ENSMUST00000122417 843 ntBASIC31.59■■■□□ 2.65
Ybx3Q9JKB3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.59■■■□□ 2.65
Ybx3Q9JKB3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Ybx3Q9JKB3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ybx3Q9JKB3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ybx3Q9JKB3 Gm13238-201ENSMUST00000117655 780 ntBASIC31.58■■■□□ 2.65
Ybx3Q9JKB3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Ybx3Q9JKB3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.57■■■□□ 2.64
Ybx3Q9JKB3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.57■■■□□ 2.64
Ybx3Q9JKB3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC31.57■■■□□ 2.64
Ybx3Q9JKB3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Ybx3Q9JKB3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Ybx3Q9JKB3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Ybx3Q9JKB3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC31.55■■■□□ 2.64
Ybx3Q9JKB3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Ybx3Q9JKB3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms