Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.47■■□□□ 1.67
Lmcd1Q8VEE1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Lmcd1Q8VEE1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
Lmcd1Q8VEE1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.45■■□□□ 1.66
Lmcd1Q8VEE1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Lmcd1Q8VEE1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Lmcd1Q8VEE1 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 Zxda-201ENSMUST00000117281 2621 ntBASIC25.41■■□□□ 1.66
Lmcd1Q8VEE1 Gm9812-201ENSMUST00000061934 968 ntBASIC25.4■■□□□ 1.66
Lmcd1Q8VEE1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lmcd1Q8VEE1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Lmcd1Q8VEE1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Lmcd1Q8VEE1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Rps24-207ENSMUST00000224568 714 ntBASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 AC093043.1-201ENSMUST00000226700 898 ntBASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Lmcd1Q8VEE1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Lmcd1Q8VEE1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Lmcd1Q8VEE1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
Lmcd1Q8VEE1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Lmcd1Q8VEE1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.32■■□□□ 1.64
Lmcd1Q8VEE1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.32■■□□□ 1.64
Lmcd1Q8VEE1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Lmcd1Q8VEE1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.3■■□□□ 1.64
Lmcd1Q8VEE1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Lmcd1Q8VEE1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lmcd1Q8VEE1 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.28■■□□□ 1.64
Lmcd1Q8VEE1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Lmcd1Q8VEE1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.27■■□□□ 1.64
Lmcd1Q8VEE1 Gm45102-201ENSMUST00000207427 857 ntBASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Lmcd1Q8VEE1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Lmcd1Q8VEE1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lmcd1Q8VEE1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lmcd1Q8VEE1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Lmcd1Q8VEE1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Lmcd1Q8VEE1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Lmcd1Q8VEE1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Lmcd1Q8VEE1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Lmcd1Q8VEE1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Lmcd1Q8VEE1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Lmcd1Q8VEE1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Gm15820-201ENSMUST00000201566 728 ntBASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Lmcd1Q8VEE1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Lmcd1Q8VEE1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lmcd1Q8VEE1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Lmcd1Q8VEE1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Lmcd1Q8VEE1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Gm43566-201ENSMUST00000196851 808 ntBASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.15■■□□□ 1.62
Lmcd1Q8VEE1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms