Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Vars2Q3U2A8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Vars2Q3U2A8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC30.3■■■□□ 2.44
Vars2Q3U2A8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.29■■■□□ 2.44
Vars2Q3U2A8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Vars2Q3U2A8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.28■■■□□ 2.44
Vars2Q3U2A8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Vars2Q3U2A8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Vars2Q3U2A8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
Vars2Q3U2A8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
Vars2Q3U2A8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Vars2Q3U2A8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC30.26■■■□□ 2.43
Vars2Q3U2A8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Vars2Q3U2A8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Vars2Q3U2A8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC30.24■■■□□ 2.43
Vars2Q3U2A8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
Vars2Q3U2A8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Vars2Q3U2A8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.22■■■□□ 2.43
Vars2Q3U2A8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Vars2Q3U2A8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Vars2Q3U2A8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.21■■■□□ 2.43
Vars2Q3U2A8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.21■■■□□ 2.43
Vars2Q3U2A8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Vars2Q3U2A8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Vars2Q3U2A8 Gm9812-201ENSMUST00000061934 968 ntBASIC30.21■■■□□ 2.43
Vars2Q3U2A8 AC093043.1-201ENSMUST00000226700 898 ntBASIC30.2■■■□□ 2.43
Vars2Q3U2A8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC30.19■■■□□ 2.42
Vars2Q3U2A8 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Vars2Q3U2A8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
Vars2Q3U2A8 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.17■■■□□ 2.42
Vars2Q3U2A8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Vars2Q3U2A8 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Vars2Q3U2A8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Vars2Q3U2A8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC30.16■■■□□ 2.42
Vars2Q3U2A8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Vars2Q3U2A8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
Vars2Q3U2A8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Vars2Q3U2A8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Vars2Q3U2A8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
Vars2Q3U2A8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30.14■■■□□ 2.42
Vars2Q3U2A8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Vars2Q3U2A8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
Vars2Q3U2A8 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Vars2Q3U2A8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Vars2Q3U2A8 Rps24-207ENSMUST00000224568 714 ntBASIC30.11■■■□□ 2.41
Vars2Q3U2A8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Vars2Q3U2A8 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vars2Q3U2A8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vars2Q3U2A8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vars2Q3U2A8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vars2Q3U2A8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC30.09■■■□□ 2.41
Vars2Q3U2A8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Vars2Q3U2A8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.08■■■□□ 2.41
Vars2Q3U2A8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC30.07■■■□□ 2.4
Vars2Q3U2A8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Vars2Q3U2A8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Vars2Q3U2A8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Vars2Q3U2A8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Vars2Q3U2A8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vars2Q3U2A8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vars2Q3U2A8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Vars2Q3U2A8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Vars2Q3U2A8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vars2Q3U2A8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Vars2Q3U2A8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
Vars2Q3U2A8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC30.03■■■□□ 2.4
Vars2Q3U2A8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Vars2Q3U2A8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Vars2Q3U2A8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Vars2Q3U2A8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Vars2Q3U2A8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Vars2Q3U2A8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Vars2Q3U2A8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30■■■□□ 2.39
Vars2Q3U2A8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
Vars2Q3U2A8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.99■■■□□ 2.39
Vars2Q3U2A8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC29.99■■■□□ 2.39
Vars2Q3U2A8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Vars2Q3U2A8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Vars2Q3U2A8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Vars2Q3U2A8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.98■■■□□ 2.39
Vars2Q3U2A8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Vars2Q3U2A8 Gm15820-201ENSMUST00000201566 728 ntBASIC29.97■■■□□ 2.39
Vars2Q3U2A8 Gm45102-201ENSMUST00000207427 857 ntBASIC29.97■■■□□ 2.39
Vars2Q3U2A8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Vars2Q3U2A8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Vars2Q3U2A8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC29.96■■■□□ 2.39
Vars2Q3U2A8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Vars2Q3U2A8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Vars2Q3U2A8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
Vars2Q3U2A8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Vars2Q3U2A8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Vars2Q3U2A8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
Vars2Q3U2A8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.92■■■□□ 2.38
Vars2Q3U2A8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Vars2Q3U2A8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms