Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU2-29P-201ENST00000410423 189 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RNU2-39P-201ENST00000410604 198 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 HMGN1P24-201ENST00000412282 298 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 BX323014.1-201ENST00000412876 237 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RPL29P29-201ENST00000448725 423 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 PPIAP3-201ENST00000450588 505 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 PRSS3P4-201ENST00000453323 162 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RPL23AP11-201ENST00000475260 469 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC083904.1-201ENST00000487828 231 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL139099.1-201ENST00000497398 403 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC068305.1-201ENST00000497406 726 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 Y_RNA.682-201ENST00000516457 100 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RNU6-1046P-201ENST00000516538 107 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 RNU6-273P-201ENST00000516937 96 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 IGLVIV-53-201ENST00000520107 367 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL355836.1-201ENST00000555951 870 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL118558.2-201ENST00000556294 238 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL355812.1-201ENST00000603215 216 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL161756.2-201ENST00000604597 246 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL160290.3-201ENST00000604869 165 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC124303.1-201ENST00000605703 360 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC069200.1-201ENST00000609511 323 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC007546.1-201ENST00000619452 559 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AC007546.2-201ENST00000623996 360 ntBASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDLIM7Q9NR12 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDLIM7Q9NR12 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PDLIM7Q9NR12 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.84□□□□□ -1.64
PDLIM7Q9NR12 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 TAB3P1-202ENST00000452645 1634 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 PABPC1P7-201ENST00000413177 1513 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 U3.12-201ENST00000364498 214 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU6-1013P-201ENST00000384180 107 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR153-1-201ENST00000384914 90 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR200C-201ENST00000384980 68 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR449B-201ENST00000384995 97 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR195-201ENST00000385194 87 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU6-278P-201ENST00000390945 109 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR548F5-201ENST00000408421 86 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU2-15P-201ENST00000410692 191 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 OR6C66P-201ENST00000414917 930 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 CYCSP10-201ENST00000417973 294 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 OR2AS1P-201ENST00000427827 319 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 GOT2P5-201ENST00000433995 546 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC127537.2-201ENST00000439258 465 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL133547.1-201ENST00000448546 220 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MTND1P9-201ENST00000453775 944 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU7-180P-201ENST00000459240 63 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RPL23AP65-201ENST00000475608 468 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC006499.6-201ENST00000511169 607 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC026726.1-201ENST00000512859 601 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU7-51P-201ENST00000516560 62 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP503-201ENST00000517047 117 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL163153.1-201ENST00000554223 283 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 DNAJC8P1-201ENST00000554535 372 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MIR3942-201ENST00000585264 109 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 DPPA3P3-201ENST00000603842 430 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC025588.3-201ENST00000604182 274 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL354984.3-201ENST00000604803 325 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL590099.1-201ENST00000615276 138 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms