Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC009570.1-201ENST00000609599 745 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL158196.1-201ENST00000616786 434 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL359697.1-201ENST00000624879 587 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM55Q9BYV6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM55Q9BYV6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC126755.2-208ENST00000327792 462 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC138969.1-213ENST00000331436 462 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RNA5SP191-201ENST00000362585 102 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.167-201ENST00000363735 109 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.356-201ENST00000365475 113 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AL139039.1-201ENST00000401900 692 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RPS16P5-201ENST00000406501 404 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 MIR1290-201ENST00000408735 78 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 MTND3P8-201ENST00000412909 339 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 TBCAP2-201ENST00000416175 326 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RPL27AP8-201ENST00000424277 446 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AL365400.1-201ENST00000431854 640 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AMD1P1-201ENST00000457220 922 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AP001086.1-201ENST00000494882 321 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RNU4-49P-201ENST00000516080 140 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RNU6-1256P-201ENST00000516539 103 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RNU7-30P-201ENST00000516835 62 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RANP9-201ENST00000519957 271 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 MIR3667-201ENST00000581025 74 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 BNIP3P25-201ENST00000596023 559 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 VN1R80P-201ENST00000597126 338 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AP003400.5-201ENST00000624827 617 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 AC112487.2-201ENST00000637950 304 ntBASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM55Q9BYV6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 HSPA8P4-201ENST00000511877 1920 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL592182.3-201ENST00000642132 3304 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC079741.1-201ENST00000321498 212 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 RNU6-82P-201ENST00000363970 107 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 Y_RNA.529-201ENST00000384586 119 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL160275.2-201ENST00000412010 394 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 NDUFB4P7-201ENST00000423198 363 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL160275.3-201ENST00000423876 471 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AL591704.1-201ENST00000432574 275 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 VDAC1P3-201ENST00000434069 851 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 PRPS1P1-201ENST00000445305 876 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC087588.1-201ENST00000462203 316 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 RPL21P93-201ENST00000480465 489 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC083904.1-201ENST00000487828 231 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 SCOCP1-201ENST00000554676 349 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC037471.2-201ENST00000564941 598 ntBASIC4.7□□□□□ -1.66
TRIM55Q9BYV6 AC106782.4-201ENST00000568264 210 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms