Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 RNU6-799P-201ENST00000363567 107 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 SNORA67.6-201ENST00000391093 99 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 MTND4P11-201ENST00000417020 1058 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 TOMM22P6-201ENST00000465035 409 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 RPS29P20-201ENST00000489592 171 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.08□□□□□ -2.08
CPSF1Q10570 MTCO3P44-201ENST00000510977 541 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AC006499.2-201ENST00000513470 337 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 OR4V1P-201ENST00000525394 1140 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 ANP32BP3-201ENST00000559213 706 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AC090616.5-202ENST00000582111 297 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
CPSF1Q10570 WISP1-OT1-201ENST00000602893 642 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AL391834.1-201ENST00000609609 560 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.08□□□□□ -2.08
CPSF1Q10570 AL158801.5-201ENST00000623123 465 ntBASIC2.08□□□□□ -2.08
CPSF1Q10570 AL354685.2-201ENST00000448218 1447 ntBASIC2.07□□□□□ -2.08
CPSF1Q10570 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CPSF1Q10570 MIR320B1-201ENST00000390209 79 ntBASIC2.07□□□□□ -2.08
CPSF1Q10570 AL451074.3-201ENST00000437709 472 ntBASIC2.07□□□□□ -2.08
CPSF1Q10570 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.07□□□□□ -2.08
CPSF1Q10570 AC110792.2-201ENST00000510278 224 ntBASIC2.07□□□□□ -2.08
CPSF1Q10570 SNORA31.24-201ENST00000517232 57 ntBASIC2.07□□□□□ -2.08
CPSF1Q10570 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF1Q10570 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF1Q10570 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.07□□□□□ -2.08
CPSF1Q10570 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF1Q10570 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.06□□□□□ -2.08
CPSF1Q10570 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
CPSF1Q10570 SNORA14A-201ENST00000364773 135 ntBASIC2.06□□□□□ -2.08
CPSF1Q10570 AL138880.1-201ENST00000405824 642 ntBASIC2.06□□□□□ -2.08
CPSF1Q10570 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF1Q10570 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF1Q10570 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF1Q10570 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.06□□□□□ -2.08
CPSF1Q10570 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
CPSF1Q10570 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF1Q10570 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF1Q10570 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF1Q10570 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF1Q10570 Y_RNA.466-201ENST00000384294 113 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 MIR627-201ENST00000384979 97 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AL357078.2-201ENST00000416486 427 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 AC009237.2-201ENST00000421358 284 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 RPL21P66-201ENST00000426566 466 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 AC245517.4-201ENST00000448601 281 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 snoU13.18-201ENST00000459483 104 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AC098848.2-201ENST00000588023 330 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 SEPT7P9-203ENST00000604116 343 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF1Q10570 AC098657.3-201ENST00000620434 263 ntBASIC2.05□□□□□ -2.08
CPSF1Q10570 AC233981.2-201ENST00000611524 1614 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 AL355497.1-201ENST00000406262 551 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 RNA5SP38-201ENST00000410750 119 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 CKS1BP5-201ENST00000434172 273 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 DNAJC19P4-201ENST00000440115 345 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 RNA5SP490-201ENST00000517141 136 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 NPM1P52-201ENST00000518264 846 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 MTCYBP41-201ENST00000528913 1123 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF1Q10570 AC105036.1-201ENST00000566222 271 ntBASIC2.04□□□□□ -2.08
CPSF1Q10570 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF1Q10570 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF1Q10570 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF1Q10570 Y_RNA.224-201ENST00000364308 111 ntBASIC2.03□□□□□ -2.08
CPSF1Q10570 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF1Q10570 HMGN2P30-201ENST00000423237 256 ntBASIC2.03□□□□□ -2.08
CPSF1Q10570 AL445669.1-201ENST00000426743 755 ntBASIC2.03□□□□□ -2.08
CPSF1Q10570 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF1Q10570 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF1Q10570 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF1Q10570 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.03□□□□□ -2.08
CPSF1Q10570 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CPSF1Q10570 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
CPSF1Q10570 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF1Q10570 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF1Q10570 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.03□□□□□ -2.08
CPSF1Q10570 HSPE1P3-201ENST00000559254 309 ntBASIC2.03□□□□□ -2.08
CPSF1Q10570 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF1Q10570 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.03□□□□□ -2.09
CPSF1Q10570 Y_RNA.122-201ENST00000363331 96 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF1Q10570 RPL7P37-201ENST00000425095 738 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 AL513185.2-201ENST00000425543 193 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 FO393414.1-201ENST00000428697 1184 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF1Q10570 Z99714.1-201ENST00000450463 807 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 RNU7-27P-201ENST00000459281 62 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 MTCO3P35-201ENST00000485582 781 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 HMGB1P38-201ENST00000490557 577 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 AC034222.1-201ENST00000494052 532 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 AC093281.2-201ENST00000510153 597 ntBASIC2.02□□□□□ -2.09
CPSF1Q10570 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms