Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU2-64P-201ENST00000411315 191 ntBASIC5.23□□□□□ -1.57
USP11P51784 ARL5AP4-201ENST00000430731 512 ntBASIC5.23□□□□□ -1.57
USP11P51784 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.23□□□□□ -1.57
USP11P51784 AC016696.1-201ENST00000446949 318 ntBASIC5.23□□□□□ -1.57
USP11P51784 AL162388.1-201ENST00000450912 352 ntBASIC5.23□□□□□ -1.57
USP11P51784 RPS29P33-201ENST00000456717 146 ntBASIC5.23□□□□□ -1.57
USP11P51784 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.23□□□□□ -1.57
USP11P51784 AC103987.1-201ENST00000473394 348 ntBASIC5.23□□□□□ -1.57
USP11P51784 RPL22P13-201ENST00000493291 347 ntBASIC5.23□□□□□ -1.57
USP11P51784 CEACAMP10-202ENST00000495431 496 ntBASIC5.23□□□□□ -1.57
USP11P51784 AC104806.1-201ENST00000508720 308 ntBASIC5.23□□□□□ -1.57
USP11P51784 OR51K1P-201ENST00000510214 950 ntBASIC5.23□□□□□ -1.57
USP11P51784 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.23□□□□□ -1.57
USP11P51784 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.23□□□□□ -1.57
USP11P51784 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.23□□□□□ -1.57
USP11P51784 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
USP11P51784 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.23□□□□□ -1.57
USP11P51784 AC124068.1-201ENST00000563131 678 ntBASIC5.23□□□□□ -1.57
USP11P51784 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 AC016727.2-201ENST00000603988 621 ntBASIC5.23□□□□□ -1.57
USP11P51784 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 AC131238.1-201ENST00000617135 328 ntBASIC5.23□□□□□ -1.57
USP11P51784 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.23□□□□□ -1.57
USP11P51784 NXPH1-205ENST00000602349 1953 ntBASIC5.23□□□□□ -1.57
USP11P51784 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
USP11P51784 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 AL592148.3-201ENST00000608771 2646 ntBASIC5.23□□□□□ -1.57
USP11P51784 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 AL391684.1-202ENST00000641293 1636 ntBASIC5.23□□□□□ -1.57
USP11P51784 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USP11P51784 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 RNA5SP505-201ENST00000364748 108 ntBASIC5.22□□□□□ -1.57
USP11P51784 Y_RNA.389-201ENST00000383924 113 ntBASIC5.22□□□□□ -1.57
USP11P51784 Y_RNA.485-201ENST00000384395 102 ntBASIC5.22□□□□□ -1.57
USP11P51784 RNU6-278P-201ENST00000390945 109 ntBASIC5.22□□□□□ -1.57
USP11P51784 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 RNU6-1050P-201ENST00000410388 107 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.22□□□□□ -1.57
USP11P51784 AC245028.1-201ENST00000423259 256 ntBASIC5.22□□□□□ -1.57
USP11P51784 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.22□□□□□ -1.57
USP11P51784 MTCO3P45-201ENST00000443036 613 ntBASIC5.22□□□□□ -1.57
USP11P51784 RPS15AP27-201ENST00000449183 343 ntBASIC5.22□□□□□ -1.57
USP11P51784 TPT1P13-201ENST00000449760 499 ntBASIC5.22□□□□□ -1.57
USP11P51784 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.22□□□□□ -1.57
USP11P51784 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.22□□□□□ -1.57
USP11P51784 SNORD121B-201ENST00000458838 81 ntBASIC5.22□□□□□ -1.57
USP11P51784 SCARNA18-201ENST00000459004 134 ntBASIC5.22□□□□□ -1.57
USP11P51784 RN7SL354P-201ENST00000469282 294 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC108751.2-201ENST00000469993 231 ntBASIC5.22□□□□□ -1.57
USP11P51784 RN7SL738P-201ENST00000470264 297 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC022795.1-201ENST00000473808 480 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC008897.1-201ENST00000494006 347 ntBASIC5.22□□□□□ -1.57
USP11P51784 AL139099.1-201ENST00000497398 403 ntBASIC5.22□□□□□ -1.57
USP11P51784 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.22□□□□□ -1.57
USP11P51784 AC116337.1-201ENST00000509680 687 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC104057.1-201ENST00000515547 497 ntBASIC5.22□□□□□ -1.57
USP11P51784 AP000827.1-201ENST00000527814 258 ntBASIC5.22□□□□□ -1.57
USP11P51784 GSTP1P1-201ENST00000548078 319 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.22□□□□□ -1.57
USP11P51784 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.22□□□□□ -1.57
USP11P51784 uc_338.18-201ENST00000615451 175 ntBASIC5.22□□□□□ -1.57
USP11P51784 AC138627.2-201ENST00000624202 601 ntBASIC5.22□□□□□ -1.57
USP11P51784 AL596275.2-204ENST00000641628 552 ntBASIC5.22□□□□□ -1.57
USP11P51784 AL596275.2-206ENST00000641957 626 ntBASIC5.22□□□□□ -1.57
USP11P51784 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 AC091812.1-201ENST00000432235 1948 ntBASIC5.22□□□□□ -1.57
USP11P51784 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 MAPK10-286ENST00000641208 8747 ntBASIC5.22□□□□□ -1.57
USP11P51784 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP11P51784 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.22□□□□□ -1.57
USP11P51784 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
USP11P51784 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
USP11P51784 AP000542.2-201ENST00000623199 6179 ntBASIC5.21□□□□□ -1.58
USP11P51784 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP11P51784 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.21□□□□□ -1.58
USP11P51784 RNU6-562P-201ENST00000362731 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU6-1287P-201ENST00000362914 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU6-450P-201ENST00000364654 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 Y_RNA.489-201ENST00000384410 101 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU6-1127P-201ENST00000384580 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU6-1060P-201ENST00000384664 107 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNA5SP219-201ENST00000390940 113 ntBASIC5.21□□□□□ -1.58
USP11P51784 RNU6-550P-201ENST00000391057 101 ntBASIC5.21□□□□□ -1.58
USP11P51784 AL445189.1-201ENST00000405722 338 ntBASIC5.21□□□□□ -1.58
USP11P51784 Y_RNA.594-201ENST00000410373 140 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms