Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AL135938.1-201ENST00000443141 297 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AP001992.1-205ENST00000462248 379 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 MRPS17P3-201ENST00000465453 385 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AC103987.1-201ENST00000473394 348 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AC055731.1-201ENST00000474387 401 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AC022447.1-201ENST00000515358 464 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PDE6DO43924 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PDE6DO43924 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.74□□□□□ -2.13
PDE6DO43924 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.74□□□□□ -2.13
PDE6DO43924 AC040174.2-201ENST00000602701 465 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AC080013.4-201ENST00000607624 649 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AC008498.1-201ENST00000613012 531 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
PDE6DO43924 uc_338.20-201ENST00000621563 178 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 AL160394.1-201ENST00000624765 724 ntBASIC1.74□□□□□ -2.13
PDE6DO43924 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
PDE6DO43924 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDE6DO43924 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PDE6DO43924 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC1.74□□□□□ -2.13
PDE6DO43924 AC011477.1-204ENST00000623416 1325 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 SNORA62.3-201ENST00000365110 153 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 RNU6-76P-201ENST00000384060 104 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 MIR449B-201ENST00000384995 97 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 MIR514A1-201ENST00000385133 98 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 HMGB1P17-201ENST00000403495 628 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 HMGB1P49-201ENST00000418882 569 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 ZNF90P2-204ENST00000419323 1075 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 EIF4EP4-201ENST00000424916 578 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC092047.1-201ENST00000424997 240 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 HMGB1P9-201ENST00000429856 646 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 OR10R1P-201ENST00000441524 1141 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 AC007000.2-201ENST00000442564 487 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 MTCO1P48-201ENST00000448024 1096 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AL021397.1-201ENST00000451806 248 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AP1S2P1-201ENST00000457344 379 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 AL049874.1-201ENST00000489560 388 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC105252.1-201ENST00000503089 286 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 SNORA31.22-201ENST00000517204 135 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.73□□□□□ -2.13
PDE6DO43924 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 AC010186.2-204ENST00000537668 439 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC022080.3-201ENST00000544433 482 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 OR11H5P-201ENST00000554039 926 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 MIR5007-201ENST00000583098 95 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 DUXAP10-204ENST00000612052 616 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 RMST_10.1-201ENST00000616309 154 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AC006213.5-201ENST00000619673 288 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 DUXAP9-208ENST00000622815 614 ntBASIC1.73□□□□□ -2.13
PDE6DO43924 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
PDE6DO43924 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
PDE6DO43924 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.73□□□□□ -2.13
PDE6DO43924 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.73□□□□□ -2.13
PDE6DO43924 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PDE6DO43924 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PDE6DO43924 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PDE6DO43924 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.72□□□□□ -2.13
PDE6DO43924 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PDE6DO43924 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
PDE6DO43924 RNU6-217P-201ENST00000384164 104 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 MIR676-201ENST00000390702 67 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 U3.26-201ENST00000391236 204 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.72□□□□□ -2.13
PDE6DO43924 RPL36AP36-201ENST00000418616 301 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC244453.4-201ENST00000419150 388 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PDE6DO43924 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC1.72□□□□□ -2.13
PDE6DO43924 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.72□□□□□ -2.13
PDE6DO43924 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PDE6DO43924 PIGFP3-201ENST00000441918 722 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.72□□□□□ -2.13
PDE6DO43924 AC022447.3-201ENST00000506865 495 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC118465.1-201ENST00000513820 1271 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 RNA5SP341-201ENST00000516261 117 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 RNA5SP320-201ENST00000516263 124 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.72□□□□□ -2.13
PDE6DO43924 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
PDE6DO43924 ANP32BP3-201ENST00000559213 706 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC093519.1-201ENST00000566109 298 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC106734.1-201ENST00000568646 663 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 MIR3935-201ENST00000583472 104 ntBASIC1.72□□□□□ -2.13
PDE6DO43924 AC093732.2-201ENST00000607950 274 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms