Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 Y_RNA.216-201ENST00000364205 93 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RNA5SP167-201ENST00000365461 116 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 CYB5AP4-201ENST00000396692 399 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RPL5P18-201ENST00000406671 891 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 U3.35-201ENST00000408405 208 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 POLHP1-201ENST00000411806 470 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AL591848.1-201ENST00000413092 322 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC074085.1-201ENST00000413598 418 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RPL26P29-201ENST00000415623 438 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 COX6B1P1-201ENST00000415962 213 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AL360081.1-201ENST00000428299 555 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AL162389.1-201ENST00000449233 177 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 FGF7P3-201ENST00000454645 303 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC008481.1-201ENST00000463278 396 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RPL21P8-201ENST00000465083 535 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RN7SL41P-201ENST00000476144 297 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 RN7SL826P-201ENST00000479724 288 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC106872.2-201ENST00000494303 480 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 NDUFB5P1-201ENST00000508134 564 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC090136.1-201ENST00000520009 240 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 MIR5699-201ENST00000578903 90 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 AC040896.1-201ENST00000613819 479 ntBASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF3Q9ULD4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC116667.1-201ENST00000604855 2072 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC007685.1-201ENST00000329806 452 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 Y_RNA.422-201ENST00000384054 114 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 RNU4-78P-201ENST00000410940 126 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL451139.1-201ENST00000434718 346 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 RPL12P3-201ENST00000440080 396 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL353748.1-201ENST00000440753 474 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 MTCO3P45-201ENST00000443036 613 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 RBBP4P6-201ENST00000508098 202 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 RNU6-566P-201ENST00000516790 107 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 RANP3-201ENST00000530970 276 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 OR11H5P-201ENST00000554039 926 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 MIR4436B2-201ENST00000581415 91 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 MIR4436B1-201ENST00000583272 91 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL031320.1-201ENST00000604177 357 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL080274.1-201ENST00000605565 220 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC124303.1-201ENST00000605703 360 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AC020634.1-201ENST00000608701 549 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL589994.2-201ENST00000621124 579 ntBASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF3Q9ULD4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 Y_RNA.202-201ENST00000364083 110 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 SNORD74.4-201ENST00000364129 80 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 SNORA63C-201ENST00000364578 129 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 SMIM11P1-201ENST00000369586 178 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 RNU6-946P-201ENST00000383878 107 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 FAR2P4-202ENST00000425399 584 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 CALM2P2-201ENST00000428512 440 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC005019.1-201ENST00000436455 431 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 GAPDHP27-201ENST00000447427 1020 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 SCARNA18-201ENST00000459004 134 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC116533.1-201ENST00000459748 321 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 RPS26P28-201ENST00000470806 348 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC090096.1-201ENST00000489168 390 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC091868.1-201ENST00000508746 304 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 RPL39P5-202ENST00000512505 151 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC026801.2-201ENST00000515352 425 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC100770.1-201ENST00000532310 322 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC133555.2-201ENST00000550213 292 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AL163153.1-201ENST00000554223 283 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC008521.1-201ENST00000587471 187 ntBASIC5.61□□□□□ -1.51
BRPF3Q9ULD4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms