Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 AC013553.2-201ENST00000604244 589 ntBASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 USP8P1-201ENST00000494673 3183 ntBASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 MTND4P29-201ENST00000503122 1372 ntBASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
TRIM55Q9BYV6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RNU6-510P-201ENST00000391239 108 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AL357515.1-201ENST00000402967 542 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RPS12P24-201ENST00000412619 387 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 Z74021.1-201ENST00000423610 407 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 FTH1P6-201ENST00000430768 320 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC093414.1-201ENST00000434712 514 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RPS15AP27-201ENST00000449183 343 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC092001.1-201ENST00000453012 261 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 SCARNA18-201ENST00000459004 134 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RNU6-1208P-201ENST00000459588 107 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC004801.2-202ENST00000463559 283 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 TRBV1-201ENST00000476502 284 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RN7SL481P-201ENST00000477764 299 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 Y_RNA.654-201ENST00000497848 106 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 TTC39CP1-201ENST00000512513 755 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 RNA5SP392-201ENST00000516905 112 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 TVP23CP2-201ENST00000571473 623 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC002545.1-201ENST00000592511 181 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC021646.1-201ENST00000605469 484 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AP002826.1-201ENST00000608835 315 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC034102.8-201ENST00000615146 484 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 LINC00901.1-201ENST00000617252 152 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AC022140.2-201ENST00000623500 188 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 MFSD8-216ENST00000641147 4009 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 AP004289.2-201ENST00000444413 1457 ntBASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM55Q9BYV6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RNU1-108P-201ENST00000362556 161 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 SNORA31-201ENST00000362607 130 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RNU6-694P-201ENST00000364071 147 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 U3.12-201ENST00000364498 214 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 Y_RNA.373-201ENST00000365600 103 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 ARL4AP5-201ENST00000404372 599 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RPS4XP9-201ENST00000405151 780 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL356432.1-201ENST00000405809 419 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 HSPE1P8-201ENST00000406997 288 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RN7SKP32-201ENST00000410167 303 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC080125.1-201ENST00000414888 684 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL353678.1-201ENST00000422735 741 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC091390.3-201ENST00000426478 338 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 C4BPAP2-201ENST00000428434 478 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 TAAR7P-201ENST00000436141 242 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 IFNA20P-201ENST00000436840 528 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC000111.2-201ENST00000448200 210 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC073264.2-201ENST00000448886 166 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RN7SL354P-201ENST00000469282 294 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RPL7P19-201ENST00000469948 618 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 RN7SL319P-201ENST00000480656 221 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 FAM206BP-201ENST00000510179 541 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 SNORA70.16-201ENST00000516390 95 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AC022690.1-201ENST00000526681 550 ntBASIC4.72□□□□□ -1.65
TRIM55Q9BYV6 AP006289.1-201ENST00000538089 277 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms