Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 RPL23AP62-201ENST00000463396 453 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 Y_RNA.675-201ENST00000516389 149 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 CBX3P8-201ENST00000532412 525 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 AF274854.1-201ENST00000413236 615 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC073310.1-201ENST00000423226 1033 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC022022.1-201ENST00000430304 178 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 CASP3P1-201ENST00000446037 609 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AP000705.1-201ENST00000454567 350 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 RNU6-717P-201ENST00000459076 104 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 MIR4716-201ENST00000579628 84 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC123786.2-201ENST00000603459 275 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC090525.3-201ENST00000605601 189 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 AC010297.1-201ENST00000623948 149 ntBASIC1.45□□□□□ -2.18
TTC28Q96AY4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TTC28Q96AY4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.45□□□□□ -2.18
TTC28Q96AY4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TTC28Q96AY4 Y_RNA.60-201ENST00000362831 98 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 SNORA62.2-201ENST00000364672 152 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 RNU6-328P-201ENST00000390887 106 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 VTA1P2-201ENST00000520205 911 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC084851.1-201ENST00000529105 249 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 DUXAP5-201ENST00000529668 529 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 MIR3670-2-201ENST00000582974 65 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 MIR3670-1-201ENST00000584160 65 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 MIR3670-3-201ENST00000584855 65 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 MIR3670-4-201ENST00000612260 65 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AL449363.1-201ENST00000617815 186 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC010809.3-201ENST00000621310 641 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
TTC28Q96AY4 AL596028.1-201ENST00000326971 197 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC108059.3-201ENST00000456388 214 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AP000873.1-201ENST00000463987 400 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 HAUS1P1-201ENST00000505275 832 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC068714.1-201ENST00000559623 800 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.44□□□□□ -2.18
TTC28Q96AY4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.44□□□□□ -2.18
TTC28Q96AY4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TTC28Q96AY4 AL118496.1-201ENST00000440201 1812 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 FNDC3CP-201ENST00000420795 1155 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 MUPP-201ENST00000438111 566 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.43□□□□□ -2.18
TTC28Q96AY4 PDCD5P1-201ENST00000543528 309 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.43□□□□□ -2.18
TTC28Q96AY4 AL121839.1-201ENST00000556233 1185 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AL713998.2-201ENST00000604538 1198 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC096586.2-201ENST00000610260 441 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 U6.98-201ENST00000637157 84 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.43□□□□□ -2.18
TTC28Q96AY4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TTC28Q96AY4 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.43□□□□□ -2.18
TTC28Q96AY4 RNA5SP181-201ENST00000410246 98 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC090453.1-201ENST00000495560 436 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC1.43□□□□□ -2.18
TTC28Q96AY4 MIR3186-201ENST00000577404 85 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC105245.1-201ENST00000581934 244 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 AC107294.3-201ENST00000609211 526 ntBASIC1.43□□□□□ -2.18
TTC28Q96AY4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 AC091152.2-201ENST00000591628 2569 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 SNORA16.1-201ENST00000364597 132 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 CST2P1-201ENST00000425770 87 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 CBX3P6-201ENST00000430257 527 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 GTF2IP7-202ENST00000436677 309 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 TPRKBP1-201ENST00000456243 481 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TTC28Q96AY4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TTC28Q96AY4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 MTND4LP13-201ENST00000425022 298 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 MTCYBP45-201ENST00000435243 565 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 AC107032.1-201ENST00000485945 480 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.42□□□□□ -2.18
TTC28Q96AY4 AL161713.1-201ENST00000555538 145 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 RPL23AP78-201ENST00000599928 470 ntBASIC1.42□□□□□ -2.18
TTC28Q96AY4 AC009541.1-201ENST00000438279 2662 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 SNORA81-201ENST00000408493 178 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.41□□□□□ -2.18
TTC28Q96AY4 ELOCP10-201ENST00000440624 327 ntBASIC1.41□□□□□ -2.18
TTC28Q96AY4 RPL23AP7-203ENST00000449021 469 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms