Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC026634.1-201ENST00000634369 198 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 AL513185.3-201ENST00000433335 1300 ntBASIC2.15□□□□□ -2.07
LMX1AQ8TE12 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LMX1AQ8TE12 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC002543.1-201ENST00000299783 1954 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 OR1L1-202ENST00000373686 1083 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 RNU6-1074P-201ENST00000383995 104 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 MTCO2P31-201ENST00000402702 684 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 HMGN2P35-201ENST00000412164 270 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 SFR1P2-201ENST00000421841 730 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC246680.2-201ENST00000422106 389 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC092427.1-202ENST00000430569 476 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AL590762.3-201ENST00000436372 640 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 GXYLT1P1-201ENST00000446657 490 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 snoU109.4-201ENST00000458953 143 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 RPL32P14-201ENST00000463196 378 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 MLLT10P2-201ENST00000506434 249 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 HSPE1P18-201ENST00000517602 280 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 ARL2BPP5-201ENST00000523141 481 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 OR4R2P-201ENST00000530815 597 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 NIFKP8-201ENST00000560500 874 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 AL645944.1-201ENST00000603857 493 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 BNIP3P10-201ENST00000605360 577 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 VN1R7P-201ENST00000619242 903 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 ZNF663P-202ENST00000641770 1131 ntBASIC2.14□□□□□ -2.07
LMX1AQ8TE12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.14□□□□□ -2.07
LMX1AQ8TE12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RNU6-1180P-201ENST00000364935 107 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 GSTA9P-201ENST00000406231 611 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL139098.1-201ENST00000407291 389 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RNU6-575P-201ENST00000411326 105 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL133384.1-201ENST00000412744 351 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 PTP4A1P7-201ENST00000423476 514 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 UBE2D3P3-201ENST00000426992 425 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC005345.1-201ENST00000431868 217 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 MTCO3P2-201ENST00000457365 171 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RPL21P99-201ENST00000480369 423 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RPS27P27-201ENST00000498779 255 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC108210.2-201ENST00000503681 201 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC107222.1-201ENST00000510899 637 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RNA5SP200-201ENST00000516360 103 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 RNA5SP135-201ENST00000517019 125 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC026241.1-201ENST00000517873 2142 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AP003467.2-201ENST00000520175 319 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC126177.3-201ENST00000551839 688 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL021368.1-201ENST00000607490 540 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 SNHG22-203ENST00000617833 660 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC010378.1-201ENST00000619270 362 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AC010297.1-201ENST00000623948 149 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 MIR219B-201ENST00000637023 88 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 MFSD8-245ENST00000641743 948 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LMX1AQ8TE12 ZNF519P1-201ENST00000449011 1626 ntBASIC2.13□□□□□ -2.07
LMX1AQ8TE12 AL512283.1-201ENST00000606756 1384 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AC087359.1-201ENST00000508335 1740 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RNU6-115P-201ENST00000364310 107 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RNU6-354P-201ENST00000383862 107 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RNU6-610P-201ENST00000384264 107 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RNA5SP252-201ENST00000391131 119 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 U3.29-201ENST00000391296 212 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 RPL22P22-201ENST00000395439 379 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 AL136372.1-201ENST00000403060 228 ntBASIC2.12□□□□□ -2.07
LMX1AQ8TE12 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms