Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU4-55P-201ENST00000410731 137 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 RNA5SP38-201ENST00000410750 119 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 MIR1911-201ENST00000410783 80 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 SNRPFP1-201ENST00000414761 252 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AL807761.1-201ENST00000417622 171 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AL353193.1-201ENST00000421444 268 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 RPL21P109-201ENST00000422213 475 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 BNIP3P2-201ENST00000441221 577 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 SRRM1P2-201ENST00000464531 1192 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AC007182.2-201ENST00000489251 402 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 SAP18P1-201ENST00000512058 390 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-506P-201ENST00000516553 94 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AP006587.4-201ENST00000526053 529 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 SUB1P2-201ENST00000556401 297 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AC006960.3-201ENST00000561845 705 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 DPPA3P3-201ENST00000603842 430 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AL158209.2-201ENST00000619266 216 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 MIR7703-201ENST00000620784 77 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 AL049641.1-201ENST00000441055 1948 ntBASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PPP4R4Q6NUP7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 MFSD8-242ENST00000641690 4199 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 SNORD113.2-201ENST00000364166 89 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-517P-201ENST00000384362 110 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-14P-201ENST00000384630 106 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 MIR591-201ENST00000385290 95 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 NDUFS5P1-201ENST00000405668 289 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 FAR2P2-201ENST00000413041 594 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC069157.1-201ENST00000421749 137 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC092047.1-201ENST00000424997 240 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 MED13P1-201ENST00000428342 171 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC011998.1-201ENST00000433403 117 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 GPR143P-201ENST00000434155 205 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC012671.1-201ENST00000451912 203 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL513533.1-201ENST00000453728 415 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC013267.1-201ENST00000458227 267 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-420P-201ENST00000458780 107 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC087588.1-201ENST00000462203 316 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC084357.1-201ENST00000473404 255 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC006517.1-201ENST00000480485 328 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 HSPD1P15-201ENST00000505573 1122 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC006445.2-201ENST00000510061 472 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RNU7-51P-201ENST00000516560 62 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-1092P-201ENST00000516955 87 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 ATP5F1P5-201ENST00000526403 760 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 HMGB1P14-201ENST00000557424 591 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC067852.3-201ENST00000589177 561 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 RPL12P25-202ENST00000598100 674 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.6-201ENST00000603753 252 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.11-201ENST00000604059 253 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC008162.1-201ENST00000604718 254 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.1-201ENST00000604752 252 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.5-201ENST00000605253 252 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.12-201ENST00000605291 253 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.8-201ENST00000605353 252 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC007619.2-201ENST00000605743 379 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL670379.7-201ENST00000605823 252 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AC244100.1-202ENST00000621554 382 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 FRG1KP-201ENST00000623592 341 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 AL157786.1-207ENST00000627771 695 ntBASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PPP4R4Q6NUP7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 RNY1P12-201ENST00000364251 105 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 Y_RNA.367-201ENST00000365544 101 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 MIR1-2-201ENST00000384961 85 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 MIR325-201ENST00000385260 98 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-328P-201ENST00000390887 106 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 RBMY1KP-201ENST00000423480 476 ntBASIC4.1□□□□□ -1.75
PPP4R4Q6NUP7 RAC1P6-201ENST00000423911 575 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 244.1 ms