Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.08□□□□□ -1.76
COPAP53621 AL672296.1-201ENST00000427780 2158 ntBASIC4.08□□□□□ -1.76
COPAP53621 DPPA2P1-201ENST00000428060 556 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC087650.1-201ENST00000431445 468 ntBASIC4.08□□□□□ -1.76
COPAP53621 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.08□□□□□ -1.76
COPAP53621 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.08□□□□□ -1.76
COPAP53621 UBE2V1P8-201ENST00000437166 265 ntBASIC4.08□□□□□ -1.76
COPAP53621 AL451074.3-201ENST00000437709 472 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.08□□□□□ -1.76
COPAP53621 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.08□□□□□ -1.76
COPAP53621 AL136380.1-201ENST00000447970 162 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC079448.1-201ENST00000449377 373 ntBASIC4.08□□□□□ -1.76
COPAP53621 RPS11P1-201ENST00000451072 473 ntBASIC4.08□□□□□ -1.76
COPAP53621 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.08□□□□□ -1.76
COPAP53621 AL359385.1-201ENST00000456509 365 ntBASIC4.08□□□□□ -1.76
COPAP53621 HMGN2P16-201ENST00000456802 261 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC010285.1-201ENST00000470580 392 ntBASIC4.08□□□□□ -1.76
COPAP53621 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.08□□□□□ -1.76
COPAP53621 RPL29P14-201ENST00000495837 428 ntBASIC4.08□□□□□ -1.76
COPAP53621 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.08□□□□□ -1.76
COPAP53621 AC109927.2-201ENST00000506416 303 ntBASIC4.08□□□□□ -1.76
COPAP53621 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.08□□□□□ -1.76
COPAP53621 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.08□□□□□ -1.76
COPAP53621 MIR2114-201ENST00000516645 80 ntBASIC4.08□□□□□ -1.76
COPAP53621 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.08□□□□□ -1.76
COPAP53621 DEFB108D-201ENST00000527787 222 ntBASIC4.08□□□□□ -1.76
COPAP53621 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.08□□□□□ -1.76
COPAP53621 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.08□□□□□ -1.76
COPAP53621 AL845331.3-202ENST00000562856 261 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC138915.3-201ENST00000562908 1389 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AC091152.2-201ENST00000591628 2569 ntBASIC4.08□□□□□ -1.76
COPAP53621 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AC006338.1-201ENST00000618453 749 ntBASIC4.08□□□□□ -1.76
COPAP53621 XIST_intron.1-201ENST00000619444 68 ntBASIC4.08□□□□□ -1.76
COPAP53621 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AL354798.1-201ENST00000622505 329 ntBASIC4.08□□□□□ -1.76
COPAP53621 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.08□□□□□ -1.76
COPAP53621 AC019226.1-201ENST00000625666 515 ntBASIC4.08□□□□□ -1.76
COPAP53621 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COPAP53621 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COPAP53621 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.07□□□□□ -1.76
COPAP53621 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.07□□□□□ -1.76
COPAP53621 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COPAP53621 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 MIR670-201ENST00000390142 98 ntBASIC4.07□□□□□ -1.76
COPAP53621 RNU6-754P-201ENST00000391166 107 ntBASIC4.07□□□□□ -1.76
COPAP53621 PTMAP2-201ENST00000397627 327 ntBASIC4.07□□□□□ -1.76
COPAP53621 RNU4-55P-201ENST00000410731 137 ntBASIC4.07□□□□□ -1.76
COPAP53621 TOMM22P1-201ENST00000418578 312 ntBASIC4.07□□□□□ -1.76
COPAP53621 ELOCP4-201ENST00000420090 333 ntBASIC4.07□□□□□ -1.76
COPAP53621 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 AC133104.1-201ENST00000429100 218 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.07□□□□□ -1.76
COPAP53621 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 AL500522.2-201ENST00000448562 343 ntBASIC4.07□□□□□ -1.76
COPAP53621 MTND1P12-201ENST00000455231 147 ntBASIC4.07□□□□□ -1.76
COPAP53621 C1DP4-201ENST00000455429 424 ntBASIC4.07□□□□□ -1.76
COPAP53621 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 AC034236.1-201ENST00000469891 373 ntBASIC4.07□□□□□ -1.76
COPAP53621 PPIAP15-201ENST00000479662 484 ntBASIC4.07□□□□□ -1.76
COPAP53621 RPL31P61-201ENST00000496160 376 ntBASIC4.07□□□□□ -1.76
COPAP53621 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COPAP53621 AC114967.1-201ENST00000504890 259 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC011352.1-201ENST00000512300 793 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
COPAP53621 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.07□□□□□ -1.76
COPAP53621 RNU7-143P-201ENST00000516781 65 ntBASIC4.07□□□□□ -1.76
COPAP53621 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 AC125611.2-201ENST00000551907 647 ntBASIC4.07□□□□□ -1.76
COPAP53621 RPL23AP87-202ENST00000573039 466 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC025627.2-201ENST00000576220 160 ntBASIC4.07□□□□□ -1.76
COPAP53621 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
COPAP53621 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.07□□□□□ -1.76
COPAP53621 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.07□□□□□ -1.76
COPAP53621 AL022099.1-201ENST00000604551 712 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC008277.2-201ENST00000605196 797 ntBASIC4.07□□□□□ -1.76
COPAP53621 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC090517.2-201ENST00000614966 680 ntBASIC4.07□□□□□ -1.76
COPAP53621 AL391261.4-201ENST00000616012 481 ntBASIC4.07□□□□□ -1.76
COPAP53621 uc_338.12-201ENST00000616344 181 ntBASIC4.07□□□□□ -1.76
COPAP53621 MIR6130-201ENST00000619419 109 ntBASIC4.07□□□□□ -1.76
COPAP53621 AC015967.1-201ENST00000619893 476 ntBASIC4.07□□□□□ -1.76
COPAP53621 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 LRRC77P-213ENST00000637727 880 ntBASIC4.07□□□□□ -1.76
COPAP53621 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COPAP53621 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.07□□□□□ -1.76
COPAP53621 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
COPAP53621 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
COPAP53621 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.06□□□□□ -1.76
COPAP53621 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms