Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB3O75112 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB3O75112 snoU109.4-201ENST00000458953 143 ntBASIC3.51□□□□□ -1.85
LDB3O75112 U8.18-201ENST00000459285 133 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AL133162.1-201ENST00000463228 453 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AC006390.1-201ENST00000508068 283 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RNU6-358P-201ENST00000516564 75 ntBASIC3.51□□□□□ -1.85
LDB3O75112 RNU6-714P-201ENST00000516963 103 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB3O75112 AC007991.1-201ENST00000522680 631 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.51□□□□□ -1.85
LDB3O75112 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB3O75112 AC008011.1-201ENST00000545989 227 ntBASIC3.51□□□□□ -1.85
LDB3O75112 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.51□□□□□ -1.85
LDB3O75112 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 AL359999.1-201ENST00000604513 294 ntBASIC3.51□□□□□ -1.85
LDB3O75112 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.51□□□□□ -1.85
LDB3O75112 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 AC040168.1-201ENST00000623594 991 ntBASIC3.51□□□□□ -1.85
LDB3O75112 LRRC77P-213ENST00000637727 880 ntBASIC3.51□□□□□ -1.85
LDB3O75112 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
LDB3O75112 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.51□□□□□ -1.85
LDB3O75112 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
LDB3O75112 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
LDB3O75112 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 NCAPGP1-201ENST00000505112 1814 ntBASIC3.5□□□□□ -1.85
LDB3O75112 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
LDB3O75112 RNA5SP502-201ENST00000362694 119 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RNU1-18P-201ENST00000363062 164 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RNU6-97P-201ENST00000363387 104 ntBASIC3.5□□□□□ -1.85
LDB3O75112 Y_RNA.234-201ENST00000364409 97 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RNU6-359P-201ENST00000365466 108 ntBASIC3.5□□□□□ -1.85
LDB3O75112 Y_RNA.381-201ENST00000365666 102 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RNA5SP424-201ENST00000390988 115 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RPL7P60-201ENST00000397636 735 ntBASIC3.5□□□□□ -1.85
LDB3O75112 HSPE1P8-201ENST00000406997 288 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC127526.1-201ENST00000417526 366 ntBASIC3.5□□□□□ -1.85
LDB3O75112 MTND1P14-201ENST00000427400 950 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RPL31P35-201ENST00000431058 377 ntBASIC3.5□□□□□ -1.85
LDB3O75112 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AC006480.1-201ENST00000449887 378 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL353691.1-201ENST00000451332 387 ntBASIC3.5□□□□□ -1.85
LDB3O75112 NANOGP10-201ENST00000453325 895 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RBM43P1-201ENST00000476891 1081 ntBASIC3.5□□□□□ -1.85
LDB3O75112 MTCYBP18-201ENST00000501056 747 ntBASIC3.5□□□□□ -1.85
LDB3O75112 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AC005921.1-201ENST00000510589 286 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 AC046134.1-201ENST00000514454 666 ntBASIC3.5□□□□□ -1.85
LDB3O75112 RNU1-45P-201ENST00000517191 141 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 MTND1P35-201ENST00000526739 508 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
LDB3O75112 MIR5187-201ENST00000583479 76 ntBASIC3.5□□□□□ -1.85
LDB3O75112 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.5□□□□□ -1.85
LDB3O75112 AC244505.7-201ENST00000599675 272 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC004853.1-201ENST00000604902 698 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC008277.2-201ENST00000605196 797 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC093788.1-201ENST00000609356 927 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL590282.1-201ENST00000610379 1136 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL020991.1-201ENST00000612314 373 ntBASIC3.5□□□□□ -1.85
LDB3O75112 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 AC004825.2-201ENST00000616634 455 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC007742.2-201ENST00000618226 398 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL713922.2-201ENST00000619384 716 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AL161637.1-201ENST00000622380 412 ntBASIC3.5□□□□□ -1.85
LDB3O75112 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.5□□□□□ -1.85
LDB3O75112 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 MTND4P12-201ENST00000498999 1377 ntBASIC3.5□□□□□ -1.85
LDB3O75112 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
LDB3O75112 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LDB3O75112 FARSBP1-201ENST00000435808 1778 ntBASIC3.49□□□□□ -1.85
LDB3O75112 FRG1BP-201ENST00000278882 761 ntBASIC3.49□□□□□ -1.85
LDB3O75112 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
LDB3O75112 RNU6-181P-201ENST00000363225 107 ntBASIC3.49□□□□□ -1.85
LDB3O75112 SNORA7.2-201ENST00000364446 145 ntBASIC3.49□□□□□ -1.85
LDB3O75112 SNORD3H-201ENST00000384486 214 ntBASIC3.49□□□□□ -1.85
LDB3O75112 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.49□□□□□ -1.85
LDB3O75112 AL359704.1-201ENST00000411586 781 ntBASIC3.49□□□□□ -1.85
LDB3O75112 RAC1P3-201ENST00000416129 580 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms