Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC104985.2-201ENST00000620598 500 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 CKAP2P1-201ENST00000555477 2049 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC018529.3-201ENST00000624212 2254 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 AC022893.2-201ENST00000564832 3296 ntBASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4AQ8WYN0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RNU6-451P-201ENST00000362921 107 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 SNORD56.2-201ENST00000363242 71 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RNU5E-8P-201ENST00000363502 116 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 Y_RNA.160-201ENST00000363677 92 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RNU1-32P-201ENST00000363937 159 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RNU6-74P-201ENST00000384235 107 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AL356776.1-201ENST00000406574 447 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RPL21P111-201ENST00000418453 477 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 CKS1BP5-201ENST00000434172 273 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC016691.1-201ENST00000441321 413 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC114755.5-201ENST00000447760 831 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 NUTF2P3-201ENST00000448540 384 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 snoU13.3-201ENST00000459441 104 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RPL21P103-201ENST00000479921 488 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 TRBV12-2-201ENST00000489763 344 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 HNRNPCP4-201ENST00000571636 900 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AL035413.2-201ENST00000604801 525 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC010680.4-201ENST00000605334 543 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 U73479.1-201ENST00000618062 168 ntBASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ATG4AQ8WYN0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 MTCO1P9-201ENST00000505577 1534 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 CBX3P1-201ENST00000325243 554 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNA5SP502-201ENST00000362694 119 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-797P-201ENST00000363101 109 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-511P-201ENST00000363496 107 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 SNORA69-201ENST00000383895 132 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-356P-201ENST00000384140 107 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-39P-201ENST00000384344 107 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-516P-201ENST00000411381 104 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AL691449.1-201ENST00000426570 421 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RPL35AP22-201ENST00000436855 335 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 BNIP3P2-201ENST00000441221 577 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 HSPD1P15-201ENST00000505573 1122 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC018710.1-201ENST00000506509 158 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RNU6-507P-201ENST00000516045 100 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 RPL21P12-201ENST00000559810 515 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC006254.3-201ENST00000603353 884 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AC112230.1-201ENST00000604342 547 ntBASIC4.01□□□□□ -1.77
ATG4AQ8WYN0 AL158211.4-201ENST00000606988 584 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms