Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP006437.1-201ENST00000641440 3685 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 RNU6-1226P-201ENST00000384317 107 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 MIR491-201ENST00000384877 84 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 U8.14-201ENST00000390843 143 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AL356057.1-202ENST00000402263 756 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 MIR1303-201ENST00000408625 86 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 RNA5SP270-201ENST00000411361 118 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 RPL7P29-201ENST00000437151 728 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC004383.1-201ENST00000438135 289 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AL714022.1-201ENST00000439897 151 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 TPT1P14-201ENST00000448018 505 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 MTND2P19-201ENST00000449129 1012 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 KLF3P2-201ENST00000465138 268 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC116337.2-201ENST00000477662 156 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC020699.1-201ENST00000505161 445 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC104057.1-201ENST00000515547 497 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 EIF4BP1-201ENST00000554881 351 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC010928.2-201ENST00000588017 287 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC078899.2-201ENST00000595282 212 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 AC104307.1-201ENST00000616142 196 ntBASIC1.8□□□□□ -2.12
CCDC58Q4VC31 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.8□□□□□ -2.12
CCDC58Q4VC31 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 U3.12-201ENST00000364498 214 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 BTF3P7-201ENST00000407097 488 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 SNORA11.4-201ENST00000408823 129 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 RPS3AP9-201ENST00000417027 792 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 USP9YP8-201ENST00000441913 500 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 HIGD1AP2-201ENST00000446367 280 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 C1DP3-201ENST00000455013 423 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 PPP1R2P5-201ENST00000457256 603 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 RPS29P20-201ENST00000489592 171 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 CCNHP1-201ENST00000513311 678 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 HMGN1P28-201ENST00000521340 364 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC026464.5-201ENST00000562497 722 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AL109918.3-201ENST00000603072 338 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AL355877.2-201ENST00000603670 358 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC025588.3-201ENST00000604182 274 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 AC004520.1-201ENST00000608362 1413 ntBASIC1.79□□□□□ -2.12
CCDC58Q4VC31 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC58Q4VC31 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 FTLP6-201ENST00000355274 422 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 MIR208A-201ENST00000362287 71 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 RNU7-23P-201ENST00000459465 62 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AC096576.1-201ENST00000489014 359 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AL442163.2-201ENST00000553912 710 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AL590099.1-201ENST00000615276 138 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 AC090116.1-201ENST00000615679 446 ntBASIC1.78□□□□□ -2.12
CCDC58Q4VC31 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 RNU6-173P-201ENST00000364215 104 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 XGY1-201ENST00000381172 446 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AL136372.1-201ENST00000403060 228 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AL445685.2-201ENST00000422551 342 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC092573.2-201ENST00000434546 243 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC097499.1-201ENST00000444277 208 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC026801.1-201ENST00000497178 464 ntBASIC1.77□□□□□ -2.13
CCDC58Q4VC31 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms