Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC034222.1-201ENST00000494052 532 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGA1P17096 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGA1P17096 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGA1P17096 AP003385.6-201ENST00000531603 374 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.55□□□□□ -2.16
HMGA1P17096 SEPT7P9-203ENST00000604116 343 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 AC012493.3-201ENST00000604494 112 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 RMST_6.1-201ENST00000611980 203 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 AP003072.4-201ENST00000624580 310 ntBASIC1.55□□□□□ -2.16
HMGA1P17096 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HMGA1P17096 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HMGA1P17096 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HMGA1P17096 RNA5SP105-201ENST00000391123 113 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 MIR1304-201ENST00000408243 91 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 POLHP1-201ENST00000411806 470 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 RPL26P37-201ENST00000411983 438 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.54□□□□□ -2.16
HMGA1P17096 RPS15AP12-201ENST00000419498 388 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 HMGN2P30-201ENST00000423237 256 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AL121871.1-201ENST00000443413 436 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.54□□□□□ -2.16
HMGA1P17096 AL163540.1-201ENST00000485382 386 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.54□□□□□ -2.16
HMGA1P17096 CDC42P4-201ENST00000510507 563 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 OR4P1P-201ENST00000530808 1136 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AL161670.1-201ENST00000554348 137 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 MIR4781-201ENST00000585250 76 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AC008962.1-201ENST00000605729 304 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HMGA1P17096 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGA1P17096 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HMGA1P17096 ZNF209P-201ENST00000593450 2304 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 AL359851.1-201ENST00000569460 4997 ntBASIC1.54□□□□□ -2.16
HMGA1P17096 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMGA1P17096 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HMGA1P17096 Y_RNA.238-201ENST00000364441 102 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 MIR627-201ENST00000384979 97 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 AL591034.1-201ENST00000407447 340 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGA1P17096 IPO7P1-201ENST00000442031 636 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMGA1P17096 AC009474.2-201ENST00000451383 136 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 RPS23P3-201ENST00000470993 430 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGA1P17096 AC108734.3-201ENST00000481241 1165 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGA1P17096 AC108078.2-201ENST00000510750 236 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGA1P17096 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGA1P17096 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGA1P17096 MIR4421-201ENST00000578133 69 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 MIR4658-201ENST00000584344 65 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGA1P17096 AP003117.1-201ENST00000602771 554 ntBASIC1.53□□□□□ -2.16
HMGA1P17096 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HMGA1P17096 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGA1P17096 AC080128.1-201ENST00000474389 1917 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGA1P17096 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 RPL7P37-201ENST00000425095 738 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 RPL21P66-201ENST00000426566 466 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 MTATP6P4-201ENST00000427725 675 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 PSMA2P3-201ENST00000429685 675 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 SNRPEP4-201ENST00000435815 279 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGA1P17096 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGA1P17096 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGA1P17096 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 MTCO3P44-201ENST00000510977 541 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 TRMT112P2-201ENST00000512910 132 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGA1P17096 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGA1P17096 OSBPL9P3-201ENST00000534523 595 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 CENPUP2-201ENST00000555897 1186 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 AC090616.3-201ENST00000582184 217 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 AL592494.3-201ENST00000609485 464 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 AC106028.5-201ENST00000610332 395 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGA1P17096 AL031601.2-202ENST00000622650 282 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
HMGA1P17096 AL109809.4-201ENST00000603520 2185 ntBASIC1.52□□□□□ -2.17
HMGA1P17096 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGA1P17096 HMGB1P5-201ENST00000255320 642 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 SNORA7.1-201ENST00000363750 139 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 DEFB109C-201ENST00000382575 264 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 DEFB109B-201ENST00000382656 264 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 RNU1-57P-201ENST00000384491 166 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 SNRPEP2-201ENST00000397592 279 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 RNA5SP38-201ENST00000410750 119 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGA1P17096 AL136380.1-201ENST00000447970 162 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 Z99714.1-201ENST00000450463 807 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.51□□□□□ -2.17
HMGA1P17096 MTND3P24-201ENST00000506306 329 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGA1P17096 RAC1P5-201ENST00000512182 576 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 MIR514B-201ENST00000516774 80 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 OR5AQ1P-201ENST00000527596 927 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 AC090616.5-202ENST00000582111 297 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms