Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RPL23AP16-201ENST00000441715 421 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC096638.1-201ENST00000444678 216 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC109486.1-201ENST00000486833 374 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC023824.3-201ENST00000569003 562 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC008739.2-201ENST00000597006 317 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC012443.1-201ENST00000605605 231 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AL356266.1-201ENST00000623311 483 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 AC091925.2-201ENST00000625059 256 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 CKAP2P1-201ENST00000555477 2049 ntBASIC2.12□□□□□ -2.07
HLA-DQB2P05538 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HLA-DQB2P05538 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC093536.2-201ENST00000565257 1406 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 RSL24D1P4-201ENST00000400938 484 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 TRIM60P13-201ENST00000432350 1283 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 FAM103A2P-201ENST00000444122 354 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AL353705.4-201ENST00000449661 238 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 MTCO3P2-201ENST00000457365 171 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 GTF2IP9-201ENST00000502460 301 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC093767.1-201ENST00000504523 156 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 CDC42P4-201ENST00000510507 563 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 AC104229.1-201ENST00000561364 255 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 RMST_10.1-201ENST00000616309 154 ntBASIC2.11□□□□□ -2.07
HLA-DQB2P05538 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
HLA-DQB2P05538 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 ZNF519P1-201ENST00000449011 1626 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 RNU6-173P-201ENST00000364215 104 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 SNORD51-201ENST00000384320 80 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AL133384.1-201ENST00000412744 351 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 BOLA3P4-201ENST00000418151 400 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 MTCO3P30-201ENST00000426425 670 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 USP9YP8-201ENST00000441913 500 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AL589880.1-201ENST00000448271 287 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 RPL23AP7-203ENST00000449021 469 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC108729.2-201ENST00000476543 840 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 OR4G11P-201ENST00000492842 939 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC011352.3-201ENST00000505162 593 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC008716.1-201ENST00000511084 513 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC010486.1-201ENST00000511793 424 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 MIR3609-201ENST00000582661 80 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC027309.3-201ENST00000623419 351 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 AC080100.1-201ENST00000624239 5356 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HLA-DQB2P05538 MTND4P35-201ENST00000604257 1375 ntBASIC2.1□□□□□ -2.07
HLA-DQB2P05538 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 SGO1P1-201ENST00000603525 1447 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AC135776.4-201ENST00000624300 1904 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 RNU6-1155P-201ENST00000363554 107 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 MIR16-1-201ENST00000385271 89 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 DPH3P2-201ENST00000422618 250 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 VN1R42P-201ENST00000424651 344 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 Z98742.2-201ENST00000431564 187 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 UBE2D3P1-201ENST00000436669 444 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 RPS15AP7-201ENST00000439294 405 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 MTND3P4-201ENST00000453537 303 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AC023424.2-201ENST00000493479 777 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 RNA5SP471-201ENST00000516971 106 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 MTCO1P47-201ENST00000523889 1271 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 MYL12BP1-201ENST00000569826 507 ntBASIC2.09□□□□□ -2.07
HLA-DQB2P05538 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.09□□□□□ -2.07
HLA-DQB2P05538 AC245517.5-201ENST00000611529 162 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms