Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.29□□□□□ -1.88
VMP1Q96GC9 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC009902.3-201ENST00000606235 2172 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VMP1Q96GC9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VMP1Q96GC9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VMP1Q96GC9 RN7SKP123-201ENST00000410732 291 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 RNU6-193P-201ENST00000410977 107 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 MTCO1P17-201ENST00000411522 491 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 HSFY7P-201ENST00000432672 318 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 HSFY8P-201ENST00000437934 318 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 MTND3P1-201ENST00000441336 220 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 MTCO1P27-201ENST00000448269 226 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 HSFY5P-201ENST00000453726 309 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 RN7SL594P-201ENST00000470590 287 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC034222.1-201ENST00000494052 532 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC138853.1-201ENST00000503549 823 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 MIR3922-201ENST00000585192 84 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC006504.3-201ENST00000586818 523 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC002545.1-201ENST00000592511 181 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC112220.3-201ENST00000605502 502 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC106052.1-201ENST00000608029 497 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 AC093838.1-201ENST00000613014 469 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 U4.6-201ENST00000621618 127 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VMP1Q96GC9 MFSD8-233ENST00000641482 4860 ntBASIC3.28□□□□□ -1.88
VMP1Q96GC9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.89
VMP1Q96GC9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 ZNF29P-201ENST00000225587 168 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VMP1Q96GC9 RNA5SP50-201ENST00000363731 107 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VMP1Q96GC9 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 RNU6-1242P-201ENST00000391052 103 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 MIR887-201ENST00000401258 79 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AL109755.1-201ENST00000401791 649 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 FO393413.1-201ENST00000402892 195 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AL513477.1-202ENST00000417061 214 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 DBIP2-201ENST00000419076 262 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 MTCO2P20-201ENST00000437339 673 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 RBMY2UP-201ENST00000453474 324 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 KC877373.1-201ENST00000479066 408 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 RN7SL293P-201ENST00000481765 281 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 MIR2276-201ENST00000516886 89 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC007536.1-201ENST00000533382 349 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC128657.1-201ENST00000549459 145 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC074050.1-201ENST00000563247 211 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC034105.3-201ENST00000565294 442 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AF038458.1-201ENST00000588406 262 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 TPMTP1-201ENST00000592307 737 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AL592221.1-201ENST00000605266 382 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 RNU6-88P-201ENST00000606801 100 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC084757.4-201ENST00000616350 526 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 UCA1.1-201ENST00000620952 75 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC009039.2-201ENST00000624524 529 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 PCMTD1P7-201ENST00000634506 357 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AP003399.1-201ENST00000637534 361 ntBASIC3.27□□□□□ -1.89
VMP1Q96GC9 AC093010.3-201ENST00000570269 15214 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
VMP1Q96GC9 AL049781.1-201ENST00000623195 3585 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.26□□□□□ -1.89
VMP1Q96GC9 FRG1CP-201ENST00000358464 769 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms