Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 RNU6-263P-201ENST00000363811 107 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 SNORA38.1-201ENST00000364172 131 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SIX1Q15475 RNU6-821P-201ENST00000390995 107 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 RNU2-15P-201ENST00000410692 191 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 RNU6-920P-201ENST00000410926 92 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 MTATP6P27-201ENST00000416987 621 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AL353678.1-201ENST00000422735 741 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC007742.1-201ENST00000425789 329 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 EZH2P1-201ENST00000431167 291 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 ELOCP26-201ENST00000436067 329 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC091862.1-201ENST00000438016 1100 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC002381.1-201ENST00000447049 280 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 MTCO1P27-201ENST00000448269 226 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 CFTRP1-201ENST00000456646 183 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 SETP11-201ENST00000473027 690 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC078785.3-201ENST00000476607 425 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX1Q15475 FAM172BP-201ENST00000487497 1089 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 DSTNP2-201ENST00000504533 515 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC010625.1-201ENST00000511296 403 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC024589.1-201ENST00000512207 263 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX1Q15475 RNU6-27P-201ENST00000516146 107 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX1Q15475 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX1Q15475 OR6C7P-201ENST00000547875 934 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 EEF1B2P4-201ENST00000551398 348 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX1Q15475 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC012435.1-202ENST00000568772 240 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 MIR3915-201ENST00000578518 97 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX1Q15475 AC110760.3-201ENST00000598794 467 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 WISP1-OT1-201ENST00000602893 642 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AL390208.1-201ENST00000605885 644 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC090186.1-201ENST00000605991 572 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX1Q15475 MIR7844-201ENST00000616161 122 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC040168.1-201ENST00000623594 991 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC026422.1-201ENST00000623961 452 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 AC009039.2-201ENST00000624524 529 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.08□□□□□ -1.92
SIX1Q15475 ASNSP3-201ENST00000451989 1306 ntBASIC3.08□□□□□ -1.92
SIX1Q15475 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX1Q15475 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX1Q15475 RN7SKP266-201ENST00000410232 287 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX1Q15475 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX1Q15475 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX1Q15475 VDAC1P3-201ENST00000434069 851 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SIX1Q15475 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 RPS27AP8-201ENST00000452665 445 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AP001992.1-205ENST00000462248 379 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 RPL30P9-201ENST00000465586 330 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC017015.1-201ENST00000477387 286 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 TMED11P-201ENST00000479478 690 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 OR5BM1P-201ENST00000512021 366 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC024224.1-201ENST00000538284 609 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SIX1Q15475 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX1Q15475 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX1Q15475 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX1Q15475 MIR3200-201ENST00000580767 85 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.07□□□□□ -1.92
SIX1Q15475 BBIP1P1-201ENST00000602999 279 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 HMGN2P28-201ENST00000606102 262 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC106028.5-201ENST00000610332 395 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.07□□□□□ -1.92
SIX1Q15475 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.07□□□□□ -1.92
SIX1Q15475 AC091931.1-201ENST00000623488 728 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC007494.3-201ENST00000624660 743 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 AC092192.1-201ENST00000633154 1018 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 U6.98-201ENST00000637157 84 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.07□□□□□ -1.92
SIX1Q15475 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
SIX1Q15475 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms