Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.55□□□□□ -2
VSX2P58304 AP000936.2-201ENST00000447151 681 ntBASIC2.55□□□□□ -2
VSX2P58304 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 AL589880.1-201ENST00000448271 287 ntBASIC2.55□□□□□ -2
VSX2P58304 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.55□□□□□ -2
VSX2P58304 TAB3P1-202ENST00000452645 1634 ntBASIC2.55□□□□□ -2
VSX2P58304 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
VSX2P58304 AL359385.1-201ENST00000456509 365 ntBASIC2.55□□□□□ -2
VSX2P58304 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.55□□□□□ -2
VSX2P58304 TMEM251P1-201ENST00000503717 318 ntBASIC2.55□□□□□ -2
VSX2P58304 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 SNORA70.16-201ENST00000516390 95 ntBASIC2.55□□□□□ -2
VSX2P58304 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
VSX2P58304 ERHP1-201ENST00000523006 310 ntBASIC2.55□□□□□ -2
VSX2P58304 AC091564.4-201ENST00000533934 2194 ntBASIC2.55□□□□□ -2
VSX2P58304 AC125611.1-201ENST00000549563 229 ntBASIC2.55□□□□□ -2
VSX2P58304 SETP7-201ENST00000552169 453 ntBASIC2.55□□□□□ -2
VSX2P58304 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VSX2P58304 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.55□□□□□ -2
VSX2P58304 AC104072.1-201ENST00000568817 668 ntBASIC2.55□□□□□ -2
VSX2P58304 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
VSX2P58304 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.55□□□□□ -2
VSX2P58304 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.55□□□□□ -2
VSX2P58304 AC019159.1-201ENST00000605094 187 ntBASIC2.55□□□□□ -2
VSX2P58304 AC009570.1-201ENST00000609599 745 ntBASIC2.55□□□□□ -2
VSX2P58304 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.55□□□□□ -2
VSX2P58304 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VSX2P58304 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
VSX2P58304 AC002076.2-201ENST00000617362 122 ntBASIC2.55□□□□□ -2
VSX2P58304 AC084824.4-201ENST00000620106 731 ntBASIC2.55□□□□□ -2
VSX2P58304 AC120349.2-201ENST00000625002 298 ntBASIC2.55□□□□□ -2
VSX2P58304 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
VSX2P58304 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
VSX2P58304 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.54□□□□□ -2
VSX2P58304 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
VSX2P58304 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
VSX2P58304 AL513185.3-201ENST00000433335 1300 ntBASIC2.54□□□□□ -2
VSX2P58304 FTLP6-201ENST00000355274 422 ntBASIC2.54□□□□□ -2
VSX2P58304 Y_RNA.25-201ENST00000362528 102 ntBASIC2.54□□□□□ -2
VSX2P58304 RNU6-216P-201ENST00000363282 104 ntBASIC2.54□□□□□ -2
VSX2P58304 snoZ40.1-201ENST00000364540 72 ntBASIC2.54□□□□□ -2
VSX2P58304 MIR34A-201ENST00000385130 110 ntBASIC2.54□□□□□ -2
VSX2P58304 DHFRP6-201ENST00000401776 268 ntBASIC2.54□□□□□ -2
VSX2P58304 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
VSX2P58304 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.54□□□□□ -2
VSX2P58304 PTP4A1P7-201ENST00000423476 514 ntBASIC2.54□□□□□ -2
VSX2P58304 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.54□□□□□ -2
VSX2P58304 RPS29P12-201ENST00000460178 152 ntBASIC2.54□□□□□ -2
VSX2P58304 RN7SL432P-201ENST00000484057 298 ntBASIC2.54□□□□□ -2
VSX2P58304 AC023424.2-201ENST00000493479 777 ntBASIC2.54□□□□□ -2
VSX2P58304 AC114322.1-201ENST00000506771 926 ntBASIC2.54□□□□□ -2
VSX2P58304 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.54□□□□□ -2
VSX2P58304 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.54□□□□□ -2
VSX2P58304 AC096725.1-201ENST00000514266 313 ntBASIC2.54□□□□□ -2
VSX2P58304 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.54□□□□□ -2
VSX2P58304 AC087808.1-201ENST00000520501 361 ntBASIC2.54□□□□□ -2
VSX2P58304 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.54□□□□□ -2
VSX2P58304 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.54□□□□□ -2
VSX2P58304 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.54□□□□□ -2
VSX2P58304 BNIP3P24-201ENST00000593398 557 ntBASIC2.54□□□□□ -2
VSX2P58304 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.54□□□□□ -2
VSX2P58304 RPL23AP92-201ENST00000603609 255 ntBASIC2.54□□□□□ -2
VSX2P58304 AC024060.1-201ENST00000607052 494 ntBASIC2.54□□□□□ -2
VSX2P58304 AC005332.6-201ENST00000613178 446 ntBASIC2.54□□□□□ -2
VSX2P58304 AC004009.2-201ENST00000623016 728 ntBASIC2.54□□□□□ -2
VSX2P58304 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.54□□□□□ -2
VSX2P58304 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
VSX2P58304 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.54□□□□□ -2
VSX2P58304 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.53□□□□□ -2
VSX2P58304 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.53□□□□□ -2
VSX2P58304 AC109315.1-201ENST00000584143 1347 ntBASIC2.53□□□□□ -2
VSX2P58304 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VSX2P58304 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
VSX2P58304 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
VSX2P58304 RNU6-799P-201ENST00000363567 107 ntBASIC2.53□□□□□ -2
VSX2P58304 RNU6-882P-201ENST00000391025 103 ntBASIC2.53□□□□□ -2
VSX2P58304 FO393413.1-201ENST00000402892 195 ntBASIC2.53□□□□□ -2
VSX2P58304 RNA5SP38-201ENST00000410750 119 ntBASIC2.53□□□□□ -2
VSX2P58304 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.53□□□□□ -2
VSX2P58304 MTND4P3-201ENST00000417829 541 ntBASIC2.53□□□□□ -2
VSX2P58304 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 AC092427.1-201ENST00000439177 601 ntBASIC2.53□□□□□ -2
VSX2P58304 MTCYBP34-201ENST00000439552 670 ntBASIC2.53□□□□□ -2
VSX2P58304 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
VSX2P58304 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VSX2P58304 TRGVB-201ENST00000453257 471 ntBASIC2.53□□□□□ -2
VSX2P58304 KC877373.1-201ENST00000479066 408 ntBASIC2.53□□□□□ -2
VSX2P58304 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.53□□□□□ -2
VSX2P58304 MTCYBP17-201ENST00000503579 789 ntBASIC2.53□□□□□ -2
VSX2P58304 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.53□□□□□ -2
VSX2P58304 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
VSX2P58304 AC006445.2-201ENST00000510061 472 ntBASIC2.53□□□□□ -2
VSX2P58304 AC010625.1-201ENST00000511296 403 ntBASIC2.53□□□□□ -2
VSX2P58304 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.53□□□□□ -2
VSX2P58304 AC118465.1-201ENST00000513820 1271 ntBASIC2.53□□□□□ -2
VSX2P58304 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms