Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 PMCHL2-203ENST00000457791 237 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 PNPLA4P1-201ENST00000458328 305 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC128713.1-201ENST00000471495 306 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC007182.2-201ENST00000489251 402 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC093281.2-201ENST00000510153 597 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 HMGB1P47-201ENST00000511281 589 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC006499.2-201ENST00000513470 337 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 MIR4504-201ENST00000577413 92 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.45□□□□□ -2.18
SSSCA1O60232 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.45□□□□□ -2.18
SSSCA1O60232 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SSSCA1O60232 AC079395.3-201ENST00000615161 484 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 MIR219B-201ENST00000637023 88 ntBASIC1.45□□□□□ -2.18
SSSCA1O60232 AC011477.1-204ENST00000623416 1325 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 SDAD1P2-201ENST00000441308 2028 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 MTND5P28-201ENST00000438005 1594 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SSSCA1O60232 RNU2-2P-201ENST00000410396 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 OFD1P18Y-201ENST00000420889 959 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 RPL31P63-201ENST00000422565 375 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AL365496.1-201ENST00000426885 215 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 RPL7L1P10-201ENST00000427790 463 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AL356320.1-201ENST00000429616 163 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC008494.2-201ENST00000514544 370 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.44□□□□□ -2.18
SSSCA1O60232 RN7SKP96-201ENST00000516948 297 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.44□□□□□ -2.18
SSSCA1O60232 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.44□□□□□ -2.18
SSSCA1O60232 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AC007375.1-201ENST00000554513 578 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.44□□□□□ -2.18
SSSCA1O60232 MIR3616-201ENST00000584070 92 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.44□□□□□ -2.18
SSSCA1O60232 AP004247.3-201ENST00000608682 624 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.15-201ENST00000611544 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 AC025594.3-201ENST00000613068 790 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.16-201ENST00000613119 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.12-201ENST00000613778 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.20-201ENST00000613956 192 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.9-201ENST00000615427 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.11-201ENST00000616345 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.2-201ENST00000616535 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.3-201ENST00000617785 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.19-201ENST00000618602 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 RNU2-1-201ENST00000618664 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.6-201ENST00000619225 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.5-201ENST00000619465 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 U2.10-201ENST00000620268 191 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.44□□□□□ -2.18
SSSCA1O60232 MTND4P27-201ENST00000450813 1354 ntBASIC1.44□□□□□ -2.18
SSSCA1O60232 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC087359.1-201ENST00000508335 1740 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SSSCA1O60232 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.43□□□□□ -2.18
SSSCA1O60232 RNU6-234P-201ENST00000365229 104 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 MIR767-201ENST00000390228 109 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 U3.29-201ENST00000391296 212 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.43□□□□□ -2.18
SSSCA1O60232 RPS15AP27-201ENST00000449183 343 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 BX248409.1-201ENST00000455497 255 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 BZW1P2-201ENST00000473537 826 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 HSPE1P6-201ENST00000479457 291 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC034222.1-201ENST00000494052 532 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.43□□□□□ -2.18
SSSCA1O60232 MLLT10P2-201ENST00000506434 249 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 RN7SKP283-201ENST00000517197 270 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC008562.1-201ENST00000521763 330 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 MTCYBP28-201ENST00000566728 1132 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC090751.1-201ENST00000566966 267 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC012254.4-201ENST00000588843 273 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC040174.2-201ENST00000602701 465 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AL450336.1-201ENST00000605180 586 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AC073111.2-201ENST00000605657 1075 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 AL627230.6-201ENST00000611129 280 ntBASIC1.43□□□□□ -2.18
SSSCA1O60232 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SSSCA1O60232 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.43□□□□□ -2.18
SSSCA1O60232 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SSSCA1O60232 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SSSCA1O60232 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.42□□□□□ -2.18
SSSCA1O60232 AC046144.1-201ENST00000478559 1853 ntBASIC1.42□□□□□ -2.18
SSSCA1O60232 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms