Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
HOMER3Q9NSC5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOMER3Q9NSC5 AL513185.3-201ENST00000433335 1300 ntBASIC3.17□□□□□ -1.9
HOMER3Q9NSC5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HOMER3Q9NSC5 AC009812.4-201ENST00000569134 1805 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RNA5SP387-201ENST00000364226 106 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RNA5SP72-201ENST00000364442 117 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RNU6-621P-201ENST00000364752 109 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RNU6-636P-201ENST00000384598 107 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RPL19P1-201ENST00000411635 428 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RPS25P9-201ENST00000435591 252 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC002381.1-201ENST00000447049 280 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ARPC3P5-201ENST00000448802 534 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 FAM172BP-201ENST00000487497 1089 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AL049838.1-201ENST00000563647 981 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 BNIP3P22-201ENST00000593399 556 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 RPL23AP78-201ENST00000599928 470 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC012468.1-201ENST00000604888 430 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC080013.3-201ENST00000606839 578 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC016597.2-201ENST00000613256 341 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC006386.1-201ENST00000619436 415 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 AC099786.3-201ENST00000565735 1410 ntBASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
HOMER3Q9NSC5 GABRG2-229ENST00000641017 3628 ntBASIC3.15□□□□□ -1.9
HOMER3Q9NSC5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
HOMER3Q9NSC5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 MIR208A-201ENST00000362287 71 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 RNVU1-14-201ENST00000384770 164 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC006946.1-201ENST00000429106 328 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 RPL23AP58-201ENST00000440453 469 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC008155.2-201ENST00000464337 397 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 RN7SL601P-201ENST00000471221 293 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 RPL23AP11-201ENST00000475260 469 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 RPS27AP9-201ENST00000477681 438 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 VN1R104P-201ENST00000505115 1009 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 FAM60DP-201ENST00000524174 632 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 ZNF415P1-201ENST00000582279 1166 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC004987.4-201ENST00000603383 338 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC024933.1-201ENST00000608472 348 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AL445264.1-201ENST00000621719 171 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC018692.3-201ENST00000623929 123 ntBASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.91
HOMER3Q9NSC5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 VTRNA1-1-201ENST00000363120 99 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 RNU4-92P-201ENST00000363783 136 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 Y_RNA.234-201ENST00000364409 97 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 AL139095.1-201ENST00000404326 391 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 RPS3AP24-201ENST00000407896 734 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 USP9YP33-201ENST00000412220 421 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 BX119904.4-201ENST00000424402 301 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
HOMER3Q9NSC5 USP9YP35-201ENST00000435696 412 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms