Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
CCDC47Q96A33 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC47Q96A33 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL079343.1-201ENST00000572358 1771 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 Y_RNA.234-201ENST00000364409 97 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 RPL7L1P10-201ENST00000427790 463 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL356867.1-201ENST00000429623 299 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 TAAR7P-201ENST00000436141 242 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 RPL23AP76-201ENST00000441860 458 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 RNF2P1-201ENST00000442955 1010 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 RPL23AP20-201ENST00000447965 421 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 ARPC3P5-201ENST00000448802 534 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 BX322784.1-201ENST00000455793 1077 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 RPS3AP43-201ENST00000479743 781 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AP004217.1-201ENST00000480579 346 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL358832.1-201ENST00000497800 389 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 RNU6-928P-201ENST00000516876 104 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC010376.1-201ENST00000522101 334 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC013553.2-201ENST00000604244 589 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AL158211.4-201ENST00000606988 584 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC002550.2-201ENST00000621246 394 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC103798.2-201ENST00000624292 632 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC231657.1-201ENST00000624313 397 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 AC106858.1-201ENST00000637497 429 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 OR5H6-203ENST00000642105 978 ntBASIC3.31□□□□□ -1.88
CCDC47Q96A33 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC47Q96A33 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 SNORA9.2-201ENST00000365361 133 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 RNVU1-14-201ENST00000384770 164 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 MIR325-201ENST00000385260 98 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC018630.2-202ENST00000422992 927 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL590383.1-201ENST00000428602 75 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL390023.1-201ENST00000428836 262 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 OR4K11P-201ENST00000431829 904 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC129850.1-201ENST00000436203 508 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 COX6CP2-201ENST00000444980 225 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 TTC39CP1-201ENST00000512513 755 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC008837.2-201ENST00000513076 418 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 OR5G4P-201ENST00000525251 760 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC034105.3-201ENST00000565294 442 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 MIR4429-201ENST00000580105 73 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC004852.3-201ENST00000614131 326 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL357080.1-201ENST00000617394 239 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC026422.1-201ENST00000623961 452 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC079597.1-201ENST00000624306 508 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AL138960.2-201ENST00000625145 535 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 AC013437.2-201ENST00000639587 677 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 OR4G2P-202ENST00000641004 1759 ntBASIC3.3□□□□□ -1.88
CCDC47Q96A33 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC47Q96A33 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
CCDC47Q96A33 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC47Q96A33 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 AL672167.1-206ENST00000356293 943 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RNU1-105P-201ENST00000363470 161 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RNU6-343P-201ENST00000364709 104 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 MIR627-201ENST00000384979 97 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RNU6-952P-201ENST00000391164 108 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RNA5SP80-201ENST00000410475 111 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 NDUFB4P7-201ENST00000423198 363 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 PPP1R11P2-201ENST00000423543 382 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 AC022018.1-201ENST00000430685 241 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RNU6-420P-201ENST00000458780 107 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 AC097493.1-201ENST00000463958 372 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 AC104982.1-201ENST00000478775 574 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 RN7SL499P-201ENST00000481141 276 ntBASIC3.29□□□□□ -1.88
CCDC47Q96A33 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms