Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC098826.1-201ENST00000433943 471 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.5□□□□□ -2.01
SHOX2O60902 NDUFA5P7-201ENST00000452914 242 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RN7SL432P-201ENST00000484057 298 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHOX2O60902 AC135721.1-201ENST00000497954 479 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 AC008837.1-201ENST00000511513 412 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 RNA5SP356-201ENST00000515972 94 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.5□□□□□ -2.01
SHOX2O60902 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.5□□□□□ -2.01
SHOX2O60902 AC106730.3-201ENST00000624568 641 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 AP000553.5-201ENST00000641933 54 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHOX2O60902 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SHOX2O60902 PABPC1P9-201ENST00000426076 1612 ntBASIC2.5□□□□□ -2.01
SHOX2O60902 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 GDI2P1-201ENST00000429312 1336 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC087359.1-201ENST00000508335 1740 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 RNU1-112P-201ENST00000364401 164 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 RPS4XP7-201ENST00000406274 780 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AC092447.6-201ENST00000414578 210 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.49□□□□□ -2.01
SHOX2O60902 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AL589880.1-201ENST00000448271 287 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 GTF2IP12-201ENST00000456547 356 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AC104435.1-201ENST00000483483 166 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC243972.3-201ENST00000539655 198 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.49□□□□□ -2.01
SHOX2O60902 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.49□□□□□ -2.01
SHOX2O60902 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 BX649567.1-201ENST00000642071 1134 ntBASIC2.49□□□□□ -2.01
SHOX2O60902 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SHOX2O60902 AL136360.1-201ENST00000503377 1900 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 SNORD51-201ENST00000384320 80 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 SNORA41-201ENST00000384675 132 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHOX2O60902 MTCO2P31-201ENST00000402702 684 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 AL139132.1-201ENST00000431587 344 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 HSFY3P-201ENST00000444242 1191 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC104058.1-201ENST00000448028 297 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AL359385.1-201ENST00000456509 365 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 CBX3P3-201ENST00000508108 532 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 TTC39CP1-201ENST00000512513 755 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC026801.2-201ENST00000515352 425 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 RNU6-27P-201ENST00000516146 107 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.48□□□□□ -2.01
SHOX2O60902 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 AC022080.3-201ENST00000544433 482 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 NIFKP8-201ENST00000560500 874 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.48□□□□□ -2.01
SHOX2O60902 AC079791.1-201ENST00000605356 973 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 AC012443.1-201ENST00000605605 231 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.48□□□□□ -2.01
SHOX2O60902 AL137790.1-201ENST00000634283 177 ntBASIC2.48□□□□□ -2.01
SHOX2O60902 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SHOX2O60902 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SHOX2O60902 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
SHOX2O60902 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SHOX2O60902 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SHOX2O60902 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHOX2O60902 Y_RNA.118-201ENST00000363300 101 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHOX2O60902 AL356057.3-201ENST00000402607 340 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AL139098.1-201ENST00000407291 389 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AL137014.1-201ENST00000420490 1226 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SHOX2O60902 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHOX2O60902 LSM1P1-201ENST00000438629 273 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 CDC42P1-201ENST00000456658 548 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AC011352.3-201ENST00000505162 593 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AC006390.1-201ENST00000508068 283 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AC010468.3-201ENST00000508225 458 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.47□□□□□ -2.01
SHOX2O60902 AP000916.1-201ENST00000533869 835 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.47□□□□□ -2.01
SHOX2O60902 AC128657.1-201ENST00000549459 145 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AC011611.5-201ENST00000552477 578 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 SULT1C2P1-202ENST00000562418 459 ntBASIC2.47□□□□□ -2.01
SHOX2O60902 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms