Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.53□□□□□ -2.16
HMGN4O00479 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HMGN4O00479 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGN4O00479 MED6P1-201ENST00000439659 713 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AL136380.1-201ENST00000447970 162 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AC233279.1-201ENST00000455300 423 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 RNA5SP310-201ENST00000459084 116 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 SETP11-201ENST00000473027 690 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AC015908.1-201ENST00000478739 476 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 RPL23AP70-201ENST00000483361 460 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGN4O00479 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGN4O00479 AC093281.2-201ENST00000510153 597 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 RNA5SP471-201ENST00000516971 106 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AC084851.1-201ENST00000529105 249 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGN4O00479 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.53□□□□□ -2.16
HMGN4O00479 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.53□□□□□ -2.16
HMGN4O00479 MTCO2P22-201ENST00000603246 681 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 AC068944.2-201ENST00000610373 403 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
HMGN4O00479 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
HMGN4O00479 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGN4O00479 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGN4O00479 AC007342.9-201ENST00000623877 1385 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
HMGN4O00479 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMGN4O00479 Z98749.2-208ENST00000381646 500 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 SNORD65-201ENST00000391079 73 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 MCTS2P-201ENST00000394552 546 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMGN4O00479 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGN4O00479 PGBD4P3-201ENST00000440731 581 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 RPL32P28-201ENST00000443577 397 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 RPL5P13-201ENST00000462840 709 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 RPL30P14-201ENST00000482744 348 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC069528.1-202ENST00000482888 637 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 RPL23AP41-201ENST00000484754 458 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGN4O00479 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGN4O00479 AC004062.1-201ENST00000509926 645 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 AC113155.1-201ENST00000511141 769 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 OR5AQ1P-201ENST00000527596 927 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 CBX3P4-201ENST00000538909 354 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 AL442163.2-201ENST00000553912 710 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 MTCYBP28-201ENST00000566728 1132 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.52□□□□□ -2.17
HMGN4O00479 MIR4255-201ENST00000579351 72 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGN4O00479 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGN4O00479 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGN4O00479 NTAN1P1-201ENST00000603150 646 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC090525.3-201ENST00000605601 189 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.52□□□□□ -2.17
HMGN4O00479 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC010678.1-201ENST00000614118 713 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC079597.1-201ENST00000624306 508 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 HPVC1-201ENST00000629899 1198 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.52□□□□□ -2.17
HMGN4O00479 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMGN4O00479 CENPCP1-201ENST00000533085 2578 ntBASIC1.52□□□□□ -2.17
HMGN4O00479 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGN4O00479 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HMGN4O00479 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HMGN4O00479 UBE2L2-201ENST00000254302 429 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 RNU6-1293P-201ENST00000384077 107 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 RNU6-1072P-201ENST00000384703 107 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 RNU6-443P-201ENST00000384780 107 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 MIR1250-201ENST00000408098 113 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 BOLA3P4-201ENST00000418151 400 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
HMGN4O00479 snoU13.7-201ENST00000459220 104 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.51□□□□□ -2.17
HMGN4O00479 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGN4O00479 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.51□□□□□ -2.17
HMGN4O00479 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.51□□□□□ -2.17
HMGN4O00479 RNU6-156P-201ENST00000621869 107 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGN4O00479 AC110079.1-202ENST00000635213 138 ntBASIC1.51□□□□□ -2.17
HMGN4O00479 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGN4O00479 AL356292.1-201ENST00000283110 373 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HMGN4O00479 RNU6-461P-201ENST00000364195 107 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HMGN4O00479 RPL26P37-201ENST00000411983 438 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AL121871.1-201ENST00000443413 436 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 HMGN1P8-201ENST00000463578 288 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 RPS15AP34-201ENST00000487776 387 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.5□□□□□ -2.17
HMGN4O00479 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGN4O00479 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGN4O00479 NRBF2P1-201ENST00000587407 859 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AL022099.1-201ENST00000604551 712 ntBASIC1.5□□□□□ -2.17
HMGN4O00479 AC106028.5-201ENST00000610332 395 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms