Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC039056.2-201ENST00000622261 511 ntBASIC4.85□□□□□ -1.63
MRE11P49959 AC000123.2-201ENST00000623124 461 ntBASIC4.85□□□□□ -1.63
MRE11P49959 FER-210ENST00000628534 558 ntTSL 5 BASIC4.85□□□□□ -1.63
MRE11P49959 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
MRE11P49959 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.85□□□□□ -1.63
MRE11P49959 ERCC6-202ENST00000374127 1782 ntBASIC4.85□□□□□ -1.63
MRE11P49959 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
MRE11P49959 AL133412.1-201ENST00000380194 2992 ntBASIC4.85□□□□□ -1.63
MRE11P49959 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.85□□□□□ -1.63
MRE11P49959 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
MRE11P49959 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
MRE11P49959 ZNF680P1-201ENST00000436625 1469 ntBASIC4.84□□□□□ -1.63
MRE11P49959 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MRE11P49959 Y_RNA.159-201ENST00000363674 87 ntBASIC4.84□□□□□ -1.63
MRE11P49959 RNU6-343P-201ENST00000364709 104 ntBASIC4.84□□□□□ -1.63
MRE11P49959 RNU6-441P-201ENST00000384545 106 ntBASIC4.84□□□□□ -1.63
MRE11P49959 ARF4P3-201ENST00000397387 509 ntBASIC4.84□□□□□ -1.63
MRE11P49959 RNU6-908P-201ENST00000410160 94 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AL359704.1-201ENST00000411586 781 ntBASIC4.84□□□□□ -1.63
MRE11P49959 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 AL513185.2-201ENST00000425543 193 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AC018644.1-201ENST00000429934 551 ntBASIC4.84□□□□□ -1.63
MRE11P49959 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.84□□□□□ -1.63
MRE11P49959 AC114495.1-201ENST00000441274 436 ntBASIC4.84□□□□□ -1.63
MRE11P49959 CALM1P1-201ENST00000442082 433 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AC002381.1-201ENST00000447049 280 ntBASIC4.84□□□□□ -1.63
MRE11P49959 RNU6-420P-201ENST00000458780 107 ntBASIC4.84□□□□□ -1.63
MRE11P49959 UQCRHP4-201ENST00000471686 272 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AC090453.1-201ENST00000495560 436 ntBASIC4.84□□□□□ -1.63
MRE11P49959 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.84□□□□□ -1.63
MRE11P49959 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.84□□□□□ -1.63
MRE11P49959 RPL23AP94-201ENST00000512518 302 ntBASIC4.84□□□□□ -1.63
MRE11P49959 RNU6-201P-201ENST00000517100 61 ntBASIC4.84□□□□□ -1.63
MRE11P49959 IGLVIV-65-201ENST00000517313 360 ntBASIC4.84□□□□□ -1.63
MRE11P49959 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.84□□□□□ -1.63
MRE11P49959 AC022616.6-201ENST00000520479 119 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AP003730.1-201ENST00000524605 285 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.84□□□□□ -1.63
MRE11P49959 AL162413.1-201ENST00000603198 110 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AC010680.3-201ENST00000604215 520 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AP005019.3-201ENST00000620418 560 ntBASIC4.84□□□□□ -1.63
MRE11P49959 CR392039.5-201ENST00000623201 510 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AL773545.4-201ENST00000637262 310 ntBASIC4.84□□□□□ -1.63
MRE11P49959 AL513478.4-201ENST00000641636 310 ntBASIC4.84□□□□□ -1.63
MRE11P49959 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
MRE11P49959 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
MRE11P49959 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.84□□□□□ -1.64
MRE11P49959 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
MRE11P49959 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.83□□□□□ -1.64
MRE11P49959 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.83□□□□□ -1.64
MRE11P49959 AC021146.4-201ENST00000309229 279 ntBASIC4.83□□□□□ -1.64
MRE11P49959 OR5J1P-201ENST00000313544 939 ntBASIC4.83□□□□□ -1.64
MRE11P49959 MIR372-201ENST00000362225 67 ntBASIC4.83□□□□□ -1.64
MRE11P49959 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MRE11P49959 MIR649-201ENST00000384843 97 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC097374.1-203ENST00000400783 485 ntBASIC4.83□□□□□ -1.64
MRE11P49959 RNU2-8P-201ENST00000410727 190 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AL133384.1-201ENST00000412744 351 ntBASIC4.83□□□□□ -1.64
MRE11P49959 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 SNRPEP10-201ENST00000420249 274 ntBASIC4.83□□□□□ -1.64
MRE11P49959 RPS29P17-201ENST00000430795 166 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.83□□□□□ -1.64
MRE11P49959 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.83□□□□□ -1.64
MRE11P49959 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 AC023194.1-201ENST00000493084 308 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.83□□□□□ -1.64
MRE11P49959 AC006064.5-201ENST00000541782 248 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AL161713.1-201ENST00000555538 145 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.83□□□□□ -1.64
MRE11P49959 MIR4458-201ENST00000578872 75 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.83□□□□□ -1.64
MRE11P49959 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.83□□□□□ -1.64
MRE11P49959 BBIP1P1-201ENST00000602999 279 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC007621.1-201ENST00000604544 437 ntBASIC4.83□□□□□ -1.64
MRE11P49959 BNIP3P10-201ENST00000605360 577 ntBASIC4.83□□□□□ -1.64
MRE11P49959 AC055876.5-201ENST00000605667 259 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms