Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RPL12P20-201ENST00000475538 479 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 RPL22P13-201ENST00000493291 347 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC009901.1-201ENST00000506703 541 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC096745.1-201ENST00000509945 370 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 RNU6-120P-201ENST00000516077 103 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 RNU6-685P-201ENST00000517088 95 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 AC026371.1-201ENST00000551867 419 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AL110118.1-201ENST00000553543 400 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.43□□□□□ -1.54
HOXD8P13378 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC5.43□□□□□ -1.54
HOXD8P13378 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HOXD8P13378 AL512605.2-201ENST00000592972 256 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC007566.2-201ENST00000603642 413 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC083809.1-201ENST00000615051 472 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AL022401.1-201ENST00000619498 108 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 AC019206.1-201ENST00000621938 425 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.43□□□□□ -1.54
HOXD8P13378 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.43□□□□□ -1.54
HOXD8P13378 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HOXD8P13378 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HOXD8P13378 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HOXD8P13378 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXD8P13378 RNU6-1284P-201ENST00000363701 100 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 SNORA62-201ENST00000365493 153 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 SNORA16.2-201ENST00000390991 127 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 RNU2-23P-201ENST00000410545 195 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 COX5BP7-201ENST00000414780 274 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 RPS15AP40-201ENST00000419621 391 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXD8P13378 AC016712.1-201ENST00000431088 378 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD8P13378 AC239809.1-201ENST00000450470 217 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD8P13378 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.42□□□□□ -1.54
HOXD8P13378 AC026979.1-201ENST00000492525 396 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AC114801.2-201ENST00000503825 781 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 ENPP7P11-201ENST00000505915 627 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 SLC25A15P5-201ENST00000508033 253 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 RNU6-1069P-201ENST00000516612 133 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD8P13378 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.42□□□□□ -1.54
HOXD8P13378 AL121576.1-201ENST00000556055 276 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AC105129.1-201ENST00000560250 297 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 AC123786.2-201ENST00000603459 275 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 RNF138P2-201ENST00000603490 592 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD8P13378 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.42□□□□□ -1.54
HOXD8P13378 AC011978.2-201ENST00000569835 2054 ntBASIC5.42□□□□□ -1.54
HOXD8P13378 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HOXD8P13378 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.42□□□□□ -1.54
HOXD8P13378 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HOXD8P13378 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HOXD8P13378 AP001029.2-203ENST00000589795 4910 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HOXD8P13378 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 RNU6-874P-201ENST00000362390 105 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 SNORD62.1-201ENST00000362541 86 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 Y_RNA.210-201ENST00000364161 110 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RHOT1P2-201ENST00000366423 333 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HOXD8P13378 RNU6-214P-201ENST00000384130 107 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 Y_RNA.447-201ENST00000384184 113 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RNU6-823P-201ENST00000391042 103 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.41□□□□□ -1.54
HOXD8P13378 RPS12P5-201ENST00000423449 371 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 RPL7P37-201ENST00000425095 738 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 DNAJC19P7-201ENST00000428811 344 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 EZH2P1-201ENST00000431167 291 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AL353597.2-202ENST00000434901 373 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AC016831.4-201ENST00000438302 307 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 AC099799.1-201ENST00000439809 192 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.41□□□□□ -1.54
HOXD8P13378 MTCO3P45-201ENST00000443036 613 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms