Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AP000926.1-201ENST00000479573 241 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 RPS3AP50-201ENST00000487064 803 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC135721.1-201ENST00000497954 479 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 UBE2CP3-201ENST00000502715 450 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 IGKV2D-19-201ENST00000523346 262 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AP000857.1-201ENST00000532151 543 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AL133153.1-201ENST00000557756 303 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 NRBF2P1-201ENST00000587407 859 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 KC877982.1-201ENST00000602313 470 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC245517.5-201ENST00000611529 162 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC090970.3-201ENST00000612566 866 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC072046.2-201ENST00000618366 268 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC138649.5-201ENST00000637456 137 ntBASIC3.93□□□□□ -1.78
HMGB4Q8WW32 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGB4Q8WW32 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 MARK2P15-201ENST00000432204 2186 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 SNORA7.2-201ENST00000364446 145 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RNY4P16-201ENST00000364768 94 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RNU6-259P-201ENST00000383999 107 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RPL23AP32-201ENST00000395315 459 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RNU2-8P-201ENST00000410727 190 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RPS29P4-201ENST00000414733 161 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL035423.1-201ENST00000420331 213 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL139247.1-201ENST00000422768 325 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC104651.1-201ENST00000427559 735 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 ISCA1P6-201ENST00000427740 390 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC079780.1-201ENST00000428259 207 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 Z74696.2-201ENST00000436514 498 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RPL35AP22-201ENST00000436855 335 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 MTND1P12-201ENST00000455231 147 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RNU7-59P-201ENST00000459101 61 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC105252.1-201ENST00000503089 286 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC114967.1-201ENST00000504890 259 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC010587.1-201ENST00000505809 469 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC022483.1-201ENST00000514020 567 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 SCARNA14-201ENST00000516903 136 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 DEFB108D-201ENST00000527787 222 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC245505.1-201ENST00000556398 224 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 SNORD84-203ENST00000584275 78 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC007179.3-201ENST00000604976 235 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC093838.1-201ENST00000613014 469 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC008121.2-201ENST00000614647 523 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL450472.3-201ENST00000615578 367 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 uc_338.12-201ENST00000616344 181 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL357559.1-201ENST00000622228 274 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AL732618.1-201ENST00000623251 301 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 AC095031.1-201ENST00000623685 672 ntBASIC3.92□□□□□ -1.78
HMGB4Q8WW32 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGB4Q8WW32 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 MTND4P5-201ENST00000435821 1374 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC018529.3-201ENST00000624212 2254 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RNU5E-1-201ENST00000362477 120 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RNU6-525P-201ENST00000363685 104 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 U1.1-201ENST00000384101 164 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RNU5A-6P-201ENST00000384136 116 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RPS3AP24-201ENST00000407896 734 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 BX295541.1-201ENST00000417774 250 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC004552.1-201ENST00000419089 348 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 USP9YP36-201ENST00000424581 829 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC019097.1-201ENST00000424783 735 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms