Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC087481.2-201ENST00000565492 330 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.35□□□□□ -1.87
GABPAQ06546 AC012669.1-201ENST00000603209 283 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC004987.4-201ENST00000603383 338 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC097478.2-201ENST00000610572 514 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AL590240.3-201ENST00000621416 943 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC007998.5-201ENST00000622938 237 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC004009.2-201ENST00000623016 728 ntBASIC3.35□□□□□ -1.87
GABPAQ06546 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.35□□□□□ -1.87
GABPAQ06546 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
GABPAQ06546 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GABPAQ06546 AC091152.2-201ENST00000591628 2569 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC007256.1-201ENST00000392253 2765 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GABPAQ06546 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GABPAQ06546 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
GABPAQ06546 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 MIR513B-201ENST00000385136 84 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AL139421.1-201ENST00000423010 169 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC019178.2-201ENST00000423595 505 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AL590233.1-201ENST00000430017 456 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 MTND4LP10-201ENST00000435146 291 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.34□□□□□ -1.87
GABPAQ06546 HSPE1P28-201ENST00000443139 211 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC125238.1-201ENST00000448842 249 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 snoU109.4-201ENST00000458953 143 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC091951.3-201ENST00000504093 246 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.34□□□□□ -1.87
GABPAQ06546 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.34□□□□□ -1.87
GABPAQ06546 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GABPAQ06546 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.34□□□□□ -1.87
GABPAQ06546 AC006270.3-201ENST00000605967 1036 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC080013.4-201ENST00000607624 649 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC007349.4-201ENST00000608114 532 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AL590282.1-201ENST00000610379 1136 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AP003485.2-201ENST00000623636 610 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 AC006963.1-201ENST00000624003 1052 ntBASIC3.34□□□□□ -1.87
GABPAQ06546 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GABPAQ06546 AC005539.1-201ENST00000443768 1479 ntBASIC3.34□□□□□ -1.88
GABPAQ06546 AL390862.1-201ENST00000635467 1469 ntBASIC3.34□□□□□ -1.88
GABPAQ06546 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GABPAQ06546 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GABPAQ06546 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GABPAQ06546 RNU1-35P-201ENST00000362782 153 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 SNORD51-201ENST00000384320 80 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 SNORA11.2-201ENST00000408318 127 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 MIR1284-201ENST00000408337 120 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GABPAQ06546 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 ELOCP9-201ENST00000418624 239 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 RPS20P5-201ENST00000434808 360 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.33□□□□□ -1.88
GABPAQ06546 MTCYBP31-201ENST00000438855 1122 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.33□□□□□ -1.88
GABPAQ06546 AL109933.2-201ENST00000452651 260 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 HMGB1P15-201ENST00000453854 435 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
GABPAQ06546 TXNP6-201ENST00000510190 310 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AC034159.1-201ENST00000513885 583 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.33□□□□□ -1.88
GABPAQ06546 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.33□□□□□ -1.88
GABPAQ06546 HSPA8P13-201ENST00000523715 472 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AC087276.1-201ENST00000529659 480 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AC010198.2-201ENST00000550612 259 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.33□□□□□ -1.88
GABPAQ06546 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.33□□□□□ -1.88
GABPAQ06546 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
GABPAQ06546 MIR3690-201ENST00000580266 75 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 MIR4513-201ENST00000581077 86 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.33□□□□□ -1.88
GABPAQ06546 AC025588.4-201ENST00000615802 908 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.33□□□□□ -1.88
GABPAQ06546 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
GABPAQ06546 ZNF876P-202ENST00000398732 1485 ntBASIC3.33□□□□□ -1.88
GABPAQ06546 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 RNU1-112P-201ENST00000364401 164 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AL031679.1-201ENST00000400616 525 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.32□□□□□ -1.88
GABPAQ06546 RNA5SP184-201ENST00000411071 108 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 MTATP6P27-201ENST00000416987 621 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.32□□□□□ -1.88
GABPAQ06546 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 MTND3P1-201ENST00000441336 220 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 RPS24P6-201ENST00000452670 400 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 SUMO2P2-201ENST00000456482 255 ntBASIC3.32□□□□□ -1.88
GABPAQ06546 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.32□□□□□ -1.88
GABPAQ06546 RPL21P41-201ENST00000459863 264 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms